G1700971


Basic Information

Item Value
gene id G1700971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2043567 ~ 2044691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946632
gagagggagagagagagatagagagagaggagagggaaggcaGGGAAGAGGTAAAGGGAGTACAGTGCATTGATCGTGAGAAGGCTCTGATCAGAttattctctatctctctctatctctcgctctcgctctcgctctctctctcgctgcctctatctctctctctctctctcgctctcactctctctctcgctgcctctatctctctctcgctgtctctctctcgctgcctctatctctctctagctgcctctatctctctctcgctgtctctctctcgctgcctctatctctctctcgctgcctctatctctctctcgctgtctctctctcgctgcctctatctctctctcgctgcctctatctctctctcgctgtctctctctcgctgcctctatctctctctcgctgtctatcTCTGAGCCGTGAGGTCACGTTCTATCAGACTGGATCCCTGAGAGAGGTGAATATGAACAGGTTATTGATGTGAATGTAATGGGACAGAGAGATGCCATAGCAACATGTTTCCATGGTGACTATGAACAGGTTATTGATGTGAATGTAATGGGACAGAGAGATGCCGTAGCAACATGTTTCCATGGTGAATATGAACAGGTTATTGATGTGAATGTAATGGGACAGAGAGATGCCGTAGCAACATGTTTCCATGGTGACTATGAACAGGTTATTGATGTTTCCATGGTGAATATGAACAGTTATTGATGTGGAACAGACTGgagtgatgttgttgttgttgttgtttgtggacATCCACTTTAGAATAGCAGAGCAAATGTTATTTAGTTATTAACTCTAACcaaacacccccacacac

Function

NR:

description
uncharacterized protein LOC110512777

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946632 True 835 lncRNA 0.47 3 2043567 2044691

Neighbor

gene id symbol gene type direction distance location
LOC118942826 NA coding downstream 53535 1985910 ~ 1990032 (-)
ptprbl LOC106609809 coding downstream 58263 1863974 ~ 1985304 (-)
LOC110511332 LOC106576651 coding downstream 527383 1500431 ~ 1516184 (-)
LOC110499704 cpsf6 coding downstream 567050 1454566 ~ 1513068 (-)
LOC110499705 LOC106609801 coding downstream 589681 1448804 ~ 1453886 (-)
LOC110512520 LOC106609724 coding upstream 68351 2113042 ~ 2128710 (-)
LOC110499714 LOC106609803 coding upstream 84342 2129033 ~ 2138088 (-)
LOC118942827 NA coding upstream 99304 2143995 ~ 2149711 (-)
LOC118942828 LOC106594636 coding upstream 106292 2150983 ~ 2158956 (-)
LOC110499718 LOC106594636 coding upstream 145448 2190139 ~ 2223200 (-)
G1700964 NA non-coding downstream 7988 2034626 ~ 2035579 (-)
G1700963 NA non-coding downstream 21962 2021199 ~ 2021605 (-)
G1700961 NA non-coding downstream 28942 2014183 ~ 2014625 (-)
G1700945 NA non-coding downstream 68431 1974288 ~ 1975136 (-)
G1700977 NA non-coding upstream 7633 2052324 ~ 2053150 (-)
G1700985 NA non-coding upstream 13110 2057801 ~ 2058678 (-)
G1700990 NA non-coding upstream 22229 2066920 ~ 2067312 (-)
G1700978 NA non-coding upstream 56889 2101580 ~ 2102673 (-)
G1701014 NA non-coding upstream 72487 2117178 ~ 2117524 (-)
LOC118942825 frs2 other downstream 597691 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 720204 1319221 ~ 1348497 (-)
G1700312 NA other downstream 1689058 352487 ~ 354509 (-)
G1701041 NA other upstream 143742 2188433 ~ 2189666 (-)
G1701824 NA other upstream 527983 2572603 ~ 2577051 (-)
G1701930 NA other upstream 739251 2783942 ~ 2829582 (-)
G1702117 NA other upstream 1184311 3229002 ~ 3230041 (-)

Expression


Co-expression Network