Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701020 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2134847 ~ 2135242 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase subunit beta''-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946702 | True | 324 | lncRNA | 0.38 | 2 | 2134847 | 2135242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512520 | LOC106609724 | coding | downstream | 6137 | 2113042 ~ 2128710 (-) |
| LOC110499711 | ptprr | coding | downstream | 49043 | 1991477 ~ 2085804 (-) |
| LOC118942826 | NA | coding | downstream | 144815 | 1985910 ~ 1990032 (-) |
| ptprbl | LOC106609809 | coding | downstream | 149543 | 1863974 ~ 1985304 (-) |
| LOC110511332 | LOC106576651 | coding | downstream | 618663 | 1500431 ~ 1516184 (-) |
| LOC118942827 | NA | coding | upstream | 8753 | 2143995 ~ 2149711 (-) |
| LOC118942828 | LOC106594636 | coding | upstream | 15741 | 2150983 ~ 2158956 (-) |
| LOC110499718 | LOC106594636 | coding | upstream | 54897 | 2190139 ~ 2223200 (-) |
| LOC118942830 | NA | coding | upstream | 894107 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 1453288 | 3585864 ~ 4306764 (-) |
| G1701014 | NA | non-coding | downstream | 17323 | 2117178 ~ 2117524 (-) |
| G1700978 | NA | non-coding | downstream | 32174 | 2101580 ~ 2102673 (-) |
| G1700990 | NA | non-coding | downstream | 67535 | 2066920 ~ 2067312 (-) |
| G1700985 | NA | non-coding | downstream | 76169 | 2057801 ~ 2058678 (-) |
| G1700977 | NA | non-coding | downstream | 81697 | 2052324 ~ 2053150 (-) |
| G1701038 | NA | non-coding | upstream | 39081 | 2174323 ~ 2186258 (-) |
| G1701040 | NA | non-coding | upstream | 41615 | 2176857 ~ 2178915 (-) |
| G1701045 | NA | non-coding | upstream | 75762 | 2211004 ~ 2212043 (-) |
| G1701046 | NA | non-coding | upstream | 80456 | 2215698 ~ 2216205 (-) |
| G1701065 | NA | non-coding | upstream | 132258 | 2267500 ~ 2267900 (-) |
| LOC118942825 | frs2 | other | downstream | 688971 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 811484 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1780338 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 53191 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 437432 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 648700 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1093760 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 1145860 | 3281102 ~ 3518377 (-) |
