Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701038 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2174323 ~ 2186258 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946720 | False | 357 | lncRNA | 0.50 | 3 | 2174323 | 2186258 |
| TU1946721 | True | 211 | lncRNA | 0.50 | 2 | 2174323 | 2174565 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942828 | LOC106594636 | coding | downstream | 15367 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 24612 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 36235 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 45613 | 2113042 ~ 2128710 (-) |
| LOC110499711 | ptprr | coding | downstream | 88519 | 1991477 ~ 2085804 (-) |
| LOC110499718 | LOC106594636 | coding | upstream | 3881 | 2190139 ~ 2223200 (-) |
| LOC118942830 | NA | coding | upstream | 843091 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 1402272 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 2027634 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 2425624 | 4611882 ~ 4636619 (-) |
| G1701020 | NA | non-coding | downstream | 39081 | 2134847 ~ 2135242 (-) |
| G1701014 | NA | non-coding | downstream | 56799 | 2117178 ~ 2117524 (-) |
| G1700978 | NA | non-coding | downstream | 71650 | 2101580 ~ 2102673 (-) |
| G1700990 | NA | non-coding | downstream | 107011 | 2066920 ~ 2067312 (-) |
| G1700985 | NA | non-coding | downstream | 115645 | 2057801 ~ 2058678 (-) |
| G1701045 | NA | non-coding | upstream | 24746 | 2211004 ~ 2212043 (-) |
| G1701046 | NA | non-coding | upstream | 29440 | 2215698 ~ 2216205 (-) |
| G1701065 | NA | non-coding | upstream | 81242 | 2267500 ~ 2267900 (-) |
| G1701070 | NA | non-coding | upstream | 91587 | 2277845 ~ 2280070 (-) |
| G1701073 | NA | non-coding | upstream | 98056 | 2284314 ~ 2290998 (-) |
| LOC118942825 | frs2 | other | downstream | 728447 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 850960 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1819814 | 352487 ~ 354509 (-) |
| G1701041 | NA | other | upstream | 2175 | 2188433 ~ 2189666 (-) |
| G1701824 | NA | other | upstream | 386416 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 597684 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1042744 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 1094844 | 3281102 ~ 3518377 (-) |
