G1700084


Basic Information

Item Value
gene id G1700084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2195369 ~ 2199781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945493
gagtagtggtagagtagtggtatggtaatgtatggtagtgtagtggaatgtagagtagtggtagtgtagtggaatggtaatgtatggtagtgtagtggaatgtagagtaggtgtatggtaatgtatggtagtgtagtggaatgtagagtagtggtagtgtagtgtagtggtaatgtatggtagtgtagtggaatgtagagtagtggtagtgtagtgtaatggtaatgtatggtagtgtagtggaatggtaatgtatggtagtgtagtgtaatgtagagtagtggtagtgtagtggaatggtaatgtatggtagtgtagtgtaatgtagagtagtggtagtgtagtggaatgtagagtagtggtatggtaatgtatggtagtgtagtgtaatggtaatgtatggtagtgtagtggaatggtaatgtatggtagtgtagtgtaatgtagaatagtggtagtgtagtggaatggtaatgtatggtagtgtagtggaatggtaatgtatggtagtgtattggaatgtagagtagtggtagtgtagtgaaatgtagagtagtggtatggtaatgtatggtagtgtagtgtaatggtaatgtatggtagtgtagtggaatgtagagtagtggtagtgtagtgtaatggtaatgtatggtagtgtagtggaatgtagagtagtggtagtgtagtggaatggtaatgtatggtagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945493 True 709 lncRNA 0.39 2 2195369 2199781

Neighbor

gene id symbol gene type direction distance location
LOC110499712 LOC106576627 coding upstream 92944 2093766 ~ 2102425 (+)
LOC110536528 kcnmb4 coding upstream 339898 1781883 ~ 1855471 (+)
LOC110499743 cnot2 coding upstream 425715 1688942 ~ 1769720 (+)
LOC118942986 NA coding upstream 522076 1671059 ~ 1673293 (+)
LOC110500915 LOC106576535 coding upstream 526149 1607414 ~ 1669220 (+)
LOC118942829 LOC105023115 coding downstream 58935 2258716 ~ 2443078 (+)
LOC110490688 NA coding downstream 245825 2445606 ~ 2447635 (+)
LOC110499733 LOC106609838 coding downstream 309246 2509027 ~ 2531457 (+)
trnak-cuu-138 NA coding downstream 321471 2521252 ~ 2521324 (+)
trnak-cuu-139 NA coding downstream 322023 2521804 ~ 2521876 (+)
G1700083 NA non-coding upstream 4508 2190170 ~ 2190861 (+)
G1700072 NA non-coding upstream 47180 2143984 ~ 2148189 (+)
G1700019 NA non-coding upstream 151151 2043551 ~ 2044218 (+)
G1700008 NA non-coding upstream 160023 2024358 ~ 2035346 (+)
G1699993 ptprr non-coding upstream 198181 1992099 ~ 1997188 (+)
G1700105 NA non-coding downstream 54456 2254237 ~ 2254864 (+)
G1700111 NA non-coding downstream 67784 2267565 ~ 2267980 (+)
G1700147 NA non-coding downstream 172958 2372739 ~ 2373488 (+)
G1700155 NA non-coding downstream 190168 2389949 ~ 2393649 (+)
G1700158 NA non-coding downstream 200225 2400006 ~ 2401879 (+)
G1699934 NA other upstream 325815 1867694 ~ 1869554 (+)
G1699804 NA other upstream 656489 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 852231 1342499 ~ 1343138 (+)
LOC110519348 tbc1d15 other downstream 439559 2588642 ~ 2667278 (+)
G1701265 NA other downstream 644923 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1574258 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1733006 3932787 ~ 3936037 (+)
LOC110516816 LOC107655592 other downstream 2184275 4384016 ~ 4441236 (+)

Expression


Co-expression Network