Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701046 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2215698 ~ 2216205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946729 | True | 380 | lncRNA | 0.35 | 2 | 2215698 | 2216205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942828 | LOC106594636 | coding | downstream | 56742 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 65987 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 77610 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 86988 | 2113042 ~ 2128710 (-) |
| LOC110499711 | ptprr | coding | downstream | 129894 | 1991477 ~ 2085804 (-) |
| LOC118942830 | NA | coding | upstream | 813144 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 1372325 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 1997687 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 2395677 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 2476678 | 4692883 ~ 4704523 (-) |
| G1701045 | NA | non-coding | downstream | 3655 | 2211004 ~ 2212043 (-) |
| G1701038 | NA | non-coding | downstream | 29440 | 2174323 ~ 2186258 (-) |
| G1701040 | NA | non-coding | downstream | 36783 | 2176857 ~ 2178915 (-) |
| G1701020 | NA | non-coding | downstream | 80456 | 2134847 ~ 2135242 (-) |
| G1701014 | NA | non-coding | downstream | 98174 | 2117178 ~ 2117524 (-) |
| G1701065 | NA | non-coding | upstream | 51295 | 2267500 ~ 2267900 (-) |
| G1701070 | NA | non-coding | upstream | 61640 | 2277845 ~ 2280070 (-) |
| G1701073 | NA | non-coding | upstream | 68109 | 2284314 ~ 2290998 (-) |
| G1701096 | NA | non-coding | upstream | 121616 | 2337821 ~ 2338098 (-) |
| G1701105 | NA | non-coding | upstream | 167098 | 2383303 ~ 2387446 (-) |
| G1701041 | NA | other | downstream | 26032 | 2188433 ~ 2189666 (-) |
| LOC118942825 | frs2 | other | downstream | 769822 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 892335 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 1861189 | 352487 ~ 354509 (-) |
| G1701824 | NA | other | upstream | 356469 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 567737 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 1012797 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 1064897 | 3281102 ~ 3518377 (-) |
