G1700159


Basic Information

Item Value
gene id G1700159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2410755 ~ 2411766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1945577
acacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttattggttacatacacatggttagcagatgttattggtcacatacacatggtcagcagatgttattggtcacatacacatggtcagcagatgttattggtcacatacacatggttagcatatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcatatgttattggtcacatacacatggttagcagatgttattggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1945577 True 367 lncRNA 0.38 2 2410755 2411766

Neighbor

gene id symbol gene type direction distance location
LOC110499712 LOC106576627 coding upstream 308330 2093766 ~ 2102425 (+)
LOC110536528 kcnmb4 coding upstream 555284 1781883 ~ 1855471 (+)
LOC110499743 cnot2 coding upstream 641101 1688942 ~ 1769720 (+)
LOC118942986 NA coding upstream 737462 1671059 ~ 1673293 (+)
LOC110500915 LOC106576535 coding upstream 741535 1607414 ~ 1669220 (+)
LOC110490688 NA coding downstream 33840 2445606 ~ 2447635 (+)
LOC110499733 LOC106609838 coding downstream 97261 2509027 ~ 2531457 (+)
trnak-cuu-138 NA coding downstream 109486 2521252 ~ 2521324 (+)
trnak-cuu-139 NA coding downstream 110038 2521804 ~ 2521876 (+)
trnak-cuu-140 NA coding downstream 111346 2523112 ~ 2523184 (+)
G1700158 NA non-coding upstream 8876 2400006 ~ 2401879 (+)
G1700155 NA non-coding upstream 17106 2389949 ~ 2393649 (+)
G1700147 NA non-coding upstream 37267 2372739 ~ 2373488 (+)
G1700111 NA non-coding upstream 142775 2267565 ~ 2267980 (+)
G1700105 NA non-coding upstream 155891 2254237 ~ 2254864 (+)
LOC118942829 LOC105023115 non-coding downstream 29819 2258716 ~ 2443078 (+)
G1701124 NA non-coding downstream 31546 2443312 ~ 2443732 (+)
G1701136 NA non-coding downstream 42315 2454081 ~ 2454402 (+)
G1701137 NA non-coding downstream 43896 2455662 ~ 2455862 (+)
G1699934 NA other upstream 541201 1867694 ~ 1869554 (+)
G1699804 NA other upstream 871875 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 1067617 1342499 ~ 1343138 (+)
LOC110519348 tbc1d15 other downstream 227574 2588642 ~ 2667278 (+)
G1701265 NA other downstream 432938 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1362273 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1521021 3932787 ~ 3936037 (+)
LOC110516816 LOC107655592 other downstream 1972290 4384016 ~ 4441236 (+)

Expression


Co-expression Network