Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701129 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2443276 ~ 2443612 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946836 | True | 337 | lncRNA | 0.39 | 1 | 2443276 | 2443612 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499718 | LOC106594636 | coding | downstream | 220076 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 284320 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 293565 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 305188 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 314566 | 2113042 ~ 2128710 (-) |
| LOC118942830 | NA | coding | upstream | 585737 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 1144918 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 1770280 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 2168270 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 2249271 | 4692883 ~ 4704523 (-) |
| G1701108 | NA | non-coding | downstream | 45919 | 2396388 ~ 2397357 (-) |
| G1701105 | NA | non-coding | downstream | 55830 | 2383303 ~ 2387446 (-) |
| G1701096 | NA | non-coding | downstream | 105178 | 2337821 ~ 2338098 (-) |
| G1701073 | NA | non-coding | downstream | 152278 | 2284314 ~ 2290998 (-) |
| G1701070 | NA | non-coding | downstream | 163206 | 2277845 ~ 2280070 (-) |
| G1701128 | NA | non-coding | upstream | 570 | 2444182 ~ 2446574 (-) |
| G1701133 | NA | non-coding | upstream | 7645 | 2451257 ~ 2451491 (-) |
| G1701797 | NA | non-coding | upstream | 45543 | 2489155 ~ 2491962 (-) |
| G1701803 | NA | non-coding | upstream | 64992 | 2508604 ~ 2508842 (-) |
| G1701804 | tmem19 | non-coding | upstream | 65446 | 2509058 ~ 2511488 (-) |
| G1701041 | NA | other | downstream | 253610 | 2188433 ~ 2189666 (-) |
| LOC118942825 | frs2 | other | downstream | 997400 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 1119913 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 2088767 | 352487 ~ 354509 (-) |
| G1701824 | NA | other | upstream | 129062 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 340330 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 785390 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 837490 | 3281102 ~ 3518377 (-) |
