Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701803 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2508604 ~ 2508842 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1947676 | True | 239 | lncRNA | 0.41 | 1 | 2508604 | 2508842 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499718 | LOC106594636 | coding | downstream | 285404 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 349648 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 358893 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 370516 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 379894 | 2113042 ~ 2128710 (-) |
| LOC118942830 | NA | coding | upstream | 520507 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 1079688 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 1705050 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 2103040 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 2184041 | 4692883 ~ 4704523 (-) |
| G1701797 | NA | non-coding | downstream | 16642 | 2489155 ~ 2491962 (-) |
| G1701133 | NA | non-coding | downstream | 57113 | 2451257 ~ 2451491 (-) |
| G1701128 | NA | non-coding | downstream | 62030 | 2444182 ~ 2446574 (-) |
| G1701129 | NA | non-coding | downstream | 64992 | 2443276 ~ 2443612 (-) |
| G1701108 | NA | non-coding | downstream | 111247 | 2396388 ~ 2397357 (-) |
| G1701804 | tmem19 | non-coding | upstream | 216 | 2509058 ~ 2511488 (-) |
| G1701807 | tmem19 | non-coding | upstream | 10953 | 2519795 ~ 2520563 (-) |
| G1701809 | NA | non-coding | upstream | 13988 | 2522830 ~ 2525359 (-) |
| G1701815 | NA | non-coding | upstream | 22670 | 2531512 ~ 2532892 (-) |
| G1701837 | NA | non-coding | upstream | 53655 | 2562497 ~ 2563704 (-) |
| G1701041 | NA | other | downstream | 318938 | 2188433 ~ 2189666 (-) |
| LOC118942825 | frs2 | other | downstream | 1062728 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 1185241 | 1319221 ~ 1348497 (-) |
| G1700312 | NA | other | downstream | 2154095 | 352487 ~ 354509 (-) |
| G1701824 | NA | other | upstream | 63832 | 2572603 ~ 2577051 (-) |
| G1701930 | NA | other | upstream | 275100 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 720160 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 772260 | 3281102 ~ 3518377 (-) |
