G1701804 (tmem19)


Basic Information

Item Value
gene id G1701804
gene name tmem19
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2509058 ~ 2511488 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947677
GCACAACACATCCGTGGGAATTAACATGTAGGTGAGGCTGTCATAACACGTTttgattgattaaaacacacagaACTACAAGGTGAAGACACGGGCAGTTCTTCCGCTGAAAGTCATAGAATACCTCCTGAGCAGGAAGGTTTTATTTTGATTCATTGATTTATGTTCTATTGTTTGTTTACCTCCCAGGGCTCCGCTGTGGTCCAGACTCCTCTTCTTCAGGGCCCGTGTGGTGAGAGTCAGAGGAACCAGGATGGAGAACAACCATCGCCACGGAGACACCGGCTGGAGAGTGCCAAAATATGTGCTGGCTGTGATGGAAATTATCCAGAAGAAGAGGGAGATGGCCAGGGTGGCACACAACACGATCATATCAGTCATCATCTTGAGGTATTCTTTCATTTGTATCTCATCCTCAAAAATCATTGTGGAAGAAGTGAATAGAACCTGAAGTAGCCGAAGCCATGGCTTTGTATCCTGCTTCTTCCATTGTGGGGAAGTGCCAATACAACTAGCTAATGTAACTTGTCCCTCCCTATAAGATAACTTAGCGAGATGAAACGATTCACAGCTGTCACAGTCCTGTAGCGGAGTCAGATTTCAAAACACAGGACTCGTTGTTCATCTTCTGTGGAGTTTATATGGCGGTTGgaaaccaactttaaggtgcattaccgccaccaactggactggagtgtggaccaaAGACAGGGAAAGTCGAAATCCTAACCAATTTTCTCAACTCACTAAGAAAACGTGATACATAATGAAATACCACATTCCCG

Function

symbol description
tmem19 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM19 (transmembrane protein 19).

NR:

description
transmembrane protein 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947677 True 785 lncRNA 0.45 3 2509058 2511488

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 285858 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 350102 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 359347 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 370970 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 380348 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 517861 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 1077042 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1702404 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 2100394 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2181395 4692883 ~ 4704523 (-)
G1701803 NA non-coding downstream 216 2508604 ~ 2508842 (-)
G1701797 NA non-coding downstream 17096 2489155 ~ 2491962 (-)
G1701133 NA non-coding downstream 57567 2451257 ~ 2451491 (-)
G1701128 NA non-coding downstream 62484 2444182 ~ 2446574 (-)
G1701129 NA non-coding downstream 65446 2443276 ~ 2443612 (-)
G1701807 tmem19 non-coding upstream 8307 2519795 ~ 2520563 (-)
G1701809 NA non-coding upstream 11342 2522830 ~ 2525359 (-)
G1701815 NA non-coding upstream 20024 2531512 ~ 2532892 (-)
G1701837 NA non-coding upstream 51009 2562497 ~ 2563704 (-)
G1701824 NA non-coding upstream 61115 2572603 ~ 2577051 (-)
G1701041 NA other downstream 319392 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1063182 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1185695 1319221 ~ 1348497 (-)
G1700312 NA other downstream 2154549 352487 ~ 354509 (-)
G1701930 NA other upstream 272454 2783942 ~ 2829582 (-)
G1702117 NA other upstream 717514 3229002 ~ 3230041 (-)
G1702141 NA other upstream 769614 3281102 ~ 3518377 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_17705069_17711334 DNAJB13 coding CI01000304 null 17705033 ~ 17712467 (-)
eurasian perch (Perca fluviatilis) G163055 NA non-coding NC_053127.1 CM020924.1 3659962 ~ 3660294 (-)