G1701809


Basic Information

Item Value
gene id G1701809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2522830 ~ 2525359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947686
gtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactatcagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactgacagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaacatgtaataactgtcagaccaggttggtaaataacacaccaaaat

Function

NR:

description
Signaling mucin HKR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947686 True 378 lncRNA 0.38 2 2522830 2525359

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 299630 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 363874 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 373119 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 384742 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 394120 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 503990 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 1063171 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1688533 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 2086523 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2167524 4692883 ~ 4704523 (-)
G1701807 tmem19 non-coding downstream 2267 2519795 ~ 2520563 (-)
G1701804 tmem19 non-coding downstream 11342 2509058 ~ 2511488 (-)
G1701803 NA non-coding downstream 13988 2508604 ~ 2508842 (-)
G1701797 NA non-coding downstream 30868 2489155 ~ 2491962 (-)
G1701133 NA non-coding downstream 71339 2451257 ~ 2451491 (-)
G1701815 NA non-coding upstream 6153 2531512 ~ 2532892 (-)
G1701837 NA non-coding upstream 37138 2562497 ~ 2563704 (-)
G1701824 NA non-coding upstream 47244 2572603 ~ 2577051 (-)
G1701841 NA non-coding upstream 51779 2577138 ~ 2577347 (-)
G1701842 NA non-coding upstream 52669 2578028 ~ 2578538 (-)
G1701041 NA other downstream 333164 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1076954 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1199467 1319221 ~ 1348497 (-)
G1700312 NA other downstream 2168321 352487 ~ 354509 (-)
G1701930 NA other upstream 258583 2783942 ~ 2829582 (-)
G1702117 NA other upstream 703643 3229002 ~ 3230041 (-)
G1702141 NA other upstream 755743 3281102 ~ 3518377 (-)

Expression


Co-expression Network