G1701173


Basic Information

Item Value
gene id G1701173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2535371 ~ 2535876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946887
cacacacacacacacacactggacacacacacactggacacacacacactggacacacacacacacacacactggacacacacacacacactggactcacacacacacacacacacactggacacacacacacacacacactggacacacacacacacacacactggacacacactcacacacacacacacacactggacacacactcacacacacacactggacacacacacacacacactggacacacactcacacacacacacacacacacactggacacacacacacaccagtctaaagtttggacacctactcattccagggttcttctttatttttctattttctacattgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946887 True 360 lncRNA 0.49 2 2535371 2535876

Neighbor

gene id symbol gene type direction distance location
trnak-cuu-147 NA coding upstream 2042 2533257 ~ 2533329 (+)
trnak-cuu-146 NA coding upstream 6426 2528873 ~ 2528945 (+)
trnak-cuu-145 NA coding upstream 7069 2528230 ~ 2528302 (+)
trnak-cuu-144 NA coding upstream 7662 2527637 ~ 2527709 (+)
trnak-cuu-143 NA coding upstream 8371 2526928 ~ 2527000 (+)
LOC110500958 LOC106609839 coding downstream 5132 2541008 ~ 2575182 (+)
LOC110519746 LOC106597902 coding downstream 43356 2579232 ~ 2580459 (+)
LOC110519348 tbc1d15 coding downstream 52766 2588642 ~ 2667278 (+)
LOC118942987 NA coding downstream 194765 2730641 ~ 2731813 (+)
LOC110499725 trhde coding downstream 284011 2819887 ~ 3237572 (+)
G1701167 NA non-coding upstream 31582 2503461 ~ 2503789 (+)
G1701165 NA non-coding upstream 38346 2496392 ~ 2497025 (+)
G1701163 NA non-coding upstream 42853 2490955 ~ 2492518 (+)
G1701137 NA non-coding upstream 79509 2455662 ~ 2455862 (+)
G1701136 NA non-coding upstream 80969 2454081 ~ 2454402 (+)
G1701154 NA non-coding downstream 42057 2577933 ~ 2578978 (+)
G1701184 NA non-coding downstream 47885 2583761 ~ 2583988 (+)
G1701186 NA non-coding downstream 50305 2586181 ~ 2586423 (+)
G1701193 NA non-coding downstream 55535 2591411 ~ 2591699 (+)
G1701196 NA non-coding downstream 71330 2607206 ~ 2609450 (+)
G1699934 NA other upstream 665817 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 766094 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 866151 1607414 ~ 1669220 (+)
G1699804 NA other upstream 996491 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 1192233 1342499 ~ 1343138 (+)
G1701265 NA other downstream 308828 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1238163 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1396911 3932787 ~ 3936037 (+)
LOC110516816 LOC107655592 other downstream 1848180 4384016 ~ 4441236 (+)

Expression


Co-expression Network