G1701837


Basic Information

Item Value
gene id G1701837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2562497 ~ 2563704 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947754
AATGTAAATTATGCATCTCTCCCTGCCTGCAACAGACTGACTCGAATCAGAATGGATGCCGAATTCCTGTTCCTATTGCATCAAATGAGgcaggaccatatgttataggacagggagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttataggacagggagatcactgcaggaccatatgttataggacagggagagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttataggacagggagatcactgcaggaccatatgttataggacagggagagatcactgcaggaccatatgttataggacagggagagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttataggacagggggatcactgcaggaccatatgttacaggacagagagatcactgcaggaccatatgttataggacagggggatcactgcaggaccatatgttataggacagggagagagagagagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttataggacagagagagatcactgcaggaccatatgttacaggacaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106534442 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947754 True 686 lncRNA 0.46 3 2562497 2563704

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 339297 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 403541 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 412786 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 424409 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 433787 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 465645 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 1024826 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1650188 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 2048178 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2129179 4692883 ~ 4704523 (-)
G1701815 NA non-coding downstream 29605 2531512 ~ 2532892 (-)
G1701809 NA non-coding downstream 37138 2522830 ~ 2525359 (-)
G1701807 tmem19 non-coding downstream 41934 2519795 ~ 2520563 (-)
G1701804 tmem19 non-coding downstream 51009 2509058 ~ 2511488 (-)
G1701803 NA non-coding downstream 53655 2508604 ~ 2508842 (-)
G1701824 NA non-coding upstream 8899 2572603 ~ 2577051 (-)
G1701841 NA non-coding upstream 13434 2577138 ~ 2577347 (-)
G1701842 NA non-coding upstream 14324 2578028 ~ 2578538 (-)
G1701828 NA non-coding upstream 14869 2578573 ~ 2578974 (-)
G1701843 NA non-coding upstream 15640 2579344 ~ 2580448 (-)
G1701041 NA other downstream 372831 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1116621 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1239134 1319221 ~ 1348497 (-)
G1700312 NA other downstream 2207988 352487 ~ 354509 (-)
G1701930 NA other upstream 220238 2783942 ~ 2829582 (-)
G1702117 NA other upstream 665298 3229002 ~ 3230041 (-)
G1702141 NA other upstream 717398 3281102 ~ 3518377 (-)

Expression


Co-expression Network