G1701154


Basic Information

Item Value
gene id G1701154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2577933 ~ 2578978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946868
tcaccactttattttaagaatgtgcgatgccagaataatattagagagaatgatttatttcagcttttatttctttcatcacattcccagttggtcagaagtttacatgctaccaaatactaattgagtgtattgccattcaattgtttaacttgggtcaaacgtttcgggtagccttccacacgcttctcacaataagtctctaagaacgagtctccttcctgagcagtatgatggctgggtggtcccacggtgtttatacttgcatactattgtttatacagatgaacgtggtaccttcaggcgtttggaaattgctcccaaggatgaaccagacttgtggaggtctataatttgtttttggaggtcttggctgatttctttagattttcccatgatgttaatcaaagaggcactgagtttgaaggtagaccttgaaatacatccacaggtacacctccaattgacttaaatgatgtcaatcagaagcttctaatgtcATGACATAATtatttggaattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttgtaaaaatgacttgtgtcattcacaaaatagatgtcctaacagacttgccaaaaatatagtttgttaacaagaaaagtgtggagtggttgaaaaacgacttaatgactccaactgtatgtgcaccacgtcattgatcgctctctctctctgctgtgtccacTGAGTCCTGCAAACCCATTGGGTAACGCTGGGCAGGCCTCTtcctagctgtcactcaaatgcagGAGGTTGGCGCTCATTGGCTATAACttgaattgctagggggctggcccacgtTGGTGGAAATGTAGAGAAAATGGCTTTAAAAACCAGTTGCTTTTAAACTATGGATTTGATGGTTAATTGAGGTaaagtaattctgctcatagattaagCAGGTATGACCTATACAtggacacatccagcccaaagaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946868 True 1046 lncRNA 0.40 1 2577933 2578978

Neighbor

gene id symbol gene type direction distance location
LOC110500958 LOC106609839 coding upstream 2751 2541008 ~ 2575182 (+)
LOC110499736 NA coding upstream 37881 2533735 ~ 2540052 (+)
trnak-cuu-147 NA coding upstream 44604 2533257 ~ 2533329 (+)
trnak-cuu-146 NA coding upstream 48988 2528873 ~ 2528945 (+)
trnak-cuu-145 NA coding upstream 49631 2528230 ~ 2528302 (+)
LOC110519746 LOC106597902 coding downstream 254 2579232 ~ 2580459 (+)
LOC110519348 tbc1d15 coding downstream 9664 2588642 ~ 2667278 (+)
LOC118942987 NA coding downstream 151663 2730641 ~ 2731813 (+)
LOC110499725 trhde coding downstream 240909 2819887 ~ 3237572 (+)
LOC110516257 LOC106590998 coding downstream 806478 3385456 ~ 3391594 (+)
G1701173 NA non-coding upstream 42057 2535371 ~ 2535876 (+)
G1701167 NA non-coding upstream 74144 2503461 ~ 2503789 (+)
G1701165 NA non-coding upstream 80908 2496392 ~ 2497025 (+)
G1701163 NA non-coding upstream 85415 2490955 ~ 2492518 (+)
G1701184 NA non-coding downstream 4783 2583761 ~ 2583988 (+)
G1701186 NA non-coding downstream 7203 2586181 ~ 2586423 (+)
G1701193 NA non-coding downstream 12433 2591411 ~ 2591699 (+)
G1701196 NA non-coding downstream 28228 2607206 ~ 2609450 (+)
G1701156 NA non-coding downstream 52735 2631713 ~ 2632451 (+)
G1699934 NA other upstream 708379 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 808656 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 908713 1607414 ~ 1669220 (+)
G1699804 NA other upstream 1039053 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 1234795 1342499 ~ 1343138 (+)
G1701265 NA other downstream 265726 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1195061 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1353809 3932787 ~ 3936037 (+)
LOC110516816 LOC107655592 other downstream 1805078 4384016 ~ 4441236 (+)

Expression


Co-expression Network