G1701186


Basic Information

Item Value
gene id G1701186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2586181 ~ 2586423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1946900
CATCATCATGTTTGTGGTTGAGTGAACCAGAGACCAAGCGGTTCTTCAGAGTGTGTGTACTTGAACTTAGAGCATTATTACTGACTGCTGTAGCCTCCAGTGGGAACAGACTGAGTGGTGAGTTAGAACAGTTTATGAGAAAGTGATACACACTTCCCTTCAGACTCATCCAGGGGCCGTCCCAGAtaccccttctccttctctcctggaATATTAGCCTCATCCATCCCAGATACCCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1946900 True 243 lncRNA 0.47 1 2586181 2586423

Neighbor

gene id symbol gene type direction distance location
LOC110519746 LOC106597902 coding upstream 5722 2579232 ~ 2580459 (+)
LOC110500958 LOC106609839 coding upstream 10999 2541008 ~ 2575182 (+)
LOC110499736 NA coding upstream 46129 2533735 ~ 2540052 (+)
trnak-cuu-147 NA coding upstream 52852 2533257 ~ 2533329 (+)
trnak-cuu-146 NA coding upstream 57236 2528873 ~ 2528945 (+)
LOC110519348 tbc1d15 coding downstream 2219 2588642 ~ 2667278 (+)
LOC118942987 NA coding downstream 144218 2730641 ~ 2731813 (+)
LOC110499725 trhde coding downstream 233464 2819887 ~ 3237572 (+)
LOC110516257 LOC106590998 coding downstream 799033 3385456 ~ 3391594 (+)
irak3 irak3 coding downstream 957229 3543652 ~ 3562592 (+)
G1701184 NA non-coding upstream 2193 2583761 ~ 2583988 (+)
G1701154 NA non-coding upstream 7203 2577933 ~ 2578978 (+)
G1701173 NA non-coding upstream 50305 2535371 ~ 2535876 (+)
G1701167 NA non-coding upstream 82392 2503461 ~ 2503789 (+)
G1701193 NA non-coding downstream 4988 2591411 ~ 2591699 (+)
G1701196 NA non-coding downstream 20783 2607206 ~ 2609450 (+)
G1701156 NA non-coding downstream 45290 2631713 ~ 2632451 (+)
G1701204 NA non-coding downstream 47530 2633953 ~ 2702040 (+)
G1699934 NA other upstream 716627 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 816904 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 916961 1607414 ~ 1669220 (+)
G1699804 NA other upstream 1047301 1537956 ~ 1538880 (+)
G1699724 LOC106592130 other upstream 1243043 1342499 ~ 1343138 (+)
G1701265 NA other downstream 258281 2844704 ~ 2849603 (+)
G1701596 NA other downstream 1187616 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1346364 3932787 ~ 3936037 (+)
LOC110516816 LOC107655592 other downstream 1797633 4384016 ~ 4441236 (+)

Expression


Co-expression Network