Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701848 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2588640 ~ 2588937 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TBC1 domain family member 15-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1947767 | True | 298 | lncRNA | 0.45 | 1 | 2588640 | 2588937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499718 | LOC106594636 | coding | downstream | 365440 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 429684 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 438929 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 450552 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 459930 | 2113042 ~ 2128710 (-) |
| LOC118942830 | NA | coding | upstream | 440412 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 999593 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 1624955 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 2022945 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 2103946 | 4692883 ~ 4704523 (-) |
| G1701845 | NA | non-coding | downstream | 3720 | 2584538 ~ 2584920 (-) |
| G1701843 | NA | non-coding | downstream | 8192 | 2579344 ~ 2580448 (-) |
| G1701828 | NA | non-coding | downstream | 9666 | 2578573 ~ 2578974 (-) |
| G1701842 | NA | non-coding | downstream | 10102 | 2578028 ~ 2578538 (-) |
| G1701841 | NA | non-coding | downstream | 11293 | 2577138 ~ 2577347 (-) |
| G1701849 | NA | non-coding | upstream | 117 | 2589054 ~ 2589524 (-) |
| G1701851 | NA | non-coding | upstream | 2790 | 2591727 ~ 2591956 (-) |
| G1701852 | NA | non-coding | upstream | 3147 | 2592084 ~ 2592330 (-) |
| G1701853 | NA | non-coding | upstream | 3895 | 2592832 ~ 2593142 (-) |
| G1701854 | LOC106576658 | non-coding | upstream | 6079 | 2595016 ~ 2595237 (-) |
| G1701824 | NA | other | downstream | 13379 | 2572603 ~ 2577051 (-) |
| G1701041 | NA | other | downstream | 398974 | 2188433 ~ 2189666 (-) |
| LOC118942825 | frs2 | other | downstream | 1142764 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 1265277 | 1319221 ~ 1348497 (-) |
| G1701930 | NA | other | upstream | 195005 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 640065 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 692165 | 3281102 ~ 3518377 (-) |
| G1702914 | NA | other | upstream | 1853312 | 4442249 ~ 4444919 (-) |
