G1701863


Basic Information

Item Value
gene id G1701863
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2611157 ~ 2611484 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947783
ATTTGTGTTGTTTAAAGGGCCCAGTGTGGTCCAAATTCAGTGTTTTTATATCATATTGTCCAACAGTTGATGAAACTAAACACTGTTAAAGAGTGAAAACATTTTATCCGttttatttcctgatagttactagttgaaaaaaaaaatgatatccaCACGACCTTCTAATTAGCAGGTTGGCATGGGCGGGAGTGtcggctttccatggtgacatcacaatGCGGTAAATTGGACCAATAAcaaaaagagttccaaacctctctgccaataaaagCTAGTTTTCCTCTCCTTACTTAgatcactcccagacagtcttagAAAAATTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947783 True 328 lncRNA 0.37 1 2611157 2611484

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 387957 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 452201 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 461446 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 473069 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 482447 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 417865 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 977046 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1602408 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 2000398 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2081399 4692883 ~ 4704523 (-)
G1701860 NA non-coding downstream 1661 2607214 ~ 2609496 (-)
G1701861 NA non-coding downstream 2548 2607157 ~ 2608609 (-)
G1701859 NA non-coding downstream 4589 2606356 ~ 2606568 (-)
G1701855 NA non-coding downstream 12890 2597920 ~ 2598267 (-)
G1701854 LOC106576658 non-coding downstream 15920 2595016 ~ 2595237 (-)
G1701866 NA non-coding upstream 2514 2613998 ~ 2615007 (-)
G1701868 NA non-coding upstream 12715 2624199 ~ 2624430 (-)
G1701869 NA non-coding upstream 13180 2624664 ~ 2625753 (-)
G1701877 NA non-coding upstream 24968 2636452 ~ 2636830 (-)
G1701878 LOC106594572 non-coding upstream 27717 2639201 ~ 2648477 (-)
G1701824 NA other downstream 35896 2572603 ~ 2577051 (-)
G1701041 NA other downstream 421491 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1165281 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1287794 1319221 ~ 1348497 (-)
G1701930 NA other upstream 172458 2783942 ~ 2829582 (-)
G1702117 NA other upstream 617518 3229002 ~ 3230041 (-)
G1702141 NA other upstream 669618 3281102 ~ 3518377 (-)
G1702914 NA other upstream 1830765 4442249 ~ 4444919 (-)

Expression


Co-expression Network