Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701878 |
| gene name | LOC106594572 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2639201 ~ 2648477 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TBC1 domain family member 15-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1947804 | True | 974 | lncRNA | 0.47 | 6 | 2639201 | 2648477 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499718 | LOC106594636 | coding | downstream | 416001 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 480245 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 489490 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 501113 | 2129033 ~ 2138088 (-) |
| LOC110512520 | LOC106609724 | coding | downstream | 510491 | 2113042 ~ 2128710 (-) |
| LOC118942830 | NA | coding | upstream | 380872 | 3029349 ~ 3030468 (-) |
| LOC110499739 | grip1 | coding | upstream | 940053 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 1565415 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 1963405 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 2044406 | 4692883 ~ 4704523 (-) |
| G1701877 | NA | non-coding | downstream | 2371 | 2636452 ~ 2636830 (-) |
| G1701869 | NA | non-coding | downstream | 13448 | 2624664 ~ 2625753 (-) |
| G1701868 | NA | non-coding | downstream | 14771 | 2624199 ~ 2624430 (-) |
| G1701866 | NA | non-coding | downstream | 24194 | 2613998 ~ 2615007 (-) |
| G1701863 | NA | non-coding | downstream | 27717 | 2611157 ~ 2611484 (-) |
| G1701893 | NA | non-coding | upstream | 17002 | 2665479 ~ 2780374 (-) |
| G1701895 | NA | non-coding | upstream | 18073 | 2666550 ~ 2666954 (-) |
| G1701894 | NA | non-coding | upstream | 19643 | 2668120 ~ 2669171 (-) |
| G1701961 | NA | non-coding | upstream | 204337 | 2852814 ~ 2854209 (-) |
| G1701967 | NA | non-coding | upstream | 211905 | 2860382 ~ 2860900 (-) |
| G1701824 | NA | other | downstream | 63940 | 2572603 ~ 2577051 (-) |
| G1701041 | NA | other | downstream | 449535 | 2188433 ~ 2189666 (-) |
| LOC118942825 | frs2 | other | downstream | 1193325 | 1363229 ~ 1446417 (-) |
| LOC110511372 | LOC106592130 | other | downstream | 1315838 | 1319221 ~ 1348497 (-) |
| G1701930 | NA | other | upstream | 135465 | 2783942 ~ 2829582 (-) |
| G1702117 | NA | other | upstream | 580525 | 3229002 ~ 3230041 (-) |
| G1702141 | NA | other | upstream | 632625 | 3281102 ~ 3518377 (-) |
| G1702914 | NA | other | upstream | 1793772 | 4442249 ~ 4444919 (-) |
