G1701880


Basic Information

Item Value
gene id G1701880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2644067 ~ 2644593 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947813
AACATTCTGTTAGAAGTGACGATGATGGTGATGACCTATTAGACTCCAGACTAACATTCTgttagtagtgatgatgatgatgacctatTAGACTCCAGACTAACATTCTGTTAgaagtgatgatggtgatgacctATTAGACTCCAGACTAACATTCTGTTAgaagtgatgatggtgatgacctATTAGACTCCTGACTAACATTCTGTTAGAAGTGATGATGATGATGACCTATTAGACTCCTGACTAACATTCTGTTAgaagtgatggtgatgatgacctATTAGACTCCTGACTAACATTCTgttagtagtgatgatgatgacctGTTAGACTCCTGACTAACATTCTgttagtagtgatgatgatgacctGTTAGACTCCTGACTAACATTCTgttagtagtgatgatgatgatgacctatTAGACTCCTGACTAACATTCTGTTAgaagtgatggtgatgatgacctATTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947813 True 478 lncRNA 0.38 2 2644067 2644593

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 420867 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 485111 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 494356 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 505979 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 515357 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 384756 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 943937 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1569299 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 1967289 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2048290 4692883 ~ 4704523 (-)
G1701877 NA non-coding downstream 7237 2636452 ~ 2636830 (-)
G1701869 NA non-coding downstream 18314 2624664 ~ 2625753 (-)
G1701868 NA non-coding downstream 19637 2624199 ~ 2624430 (-)
G1701866 NA non-coding downstream 29060 2613998 ~ 2615007 (-)
G1701863 NA non-coding downstream 32583 2611157 ~ 2611484 (-)
G1701893 NA non-coding upstream 20886 2665479 ~ 2780374 (-)
G1701895 NA non-coding upstream 21957 2666550 ~ 2666954 (-)
G1701894 NA non-coding upstream 23527 2668120 ~ 2669171 (-)
G1701961 NA non-coding upstream 208221 2852814 ~ 2854209 (-)
G1701967 NA non-coding upstream 215789 2860382 ~ 2860900 (-)
G1701824 NA other downstream 68806 2572603 ~ 2577051 (-)
G1701041 NA other downstream 454401 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1198191 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1320704 1319221 ~ 1348497 (-)
G1701930 NA other upstream 139349 2783942 ~ 2829582 (-)
G1702117 NA other upstream 584409 3229002 ~ 3230041 (-)
G1702141 NA other upstream 636509 3281102 ~ 3518377 (-)
G1702914 NA other upstream 1797656 4442249 ~ 4444919 (-)

Expression


Co-expression Network