G1701894


Basic Information

Item Value
gene id G1701894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2668120 ~ 2669171 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947853
ggtatcaaatatatatatatatatacacagtacaaaCTGCTGCAATAGACAAATCTGTACACAGAAAGATTCAGGTACGAACAGTCTTCCAGCATTACTGTTTCTGATAAATCACTTGAAGGCTGAGACCTTCATCATGCAACATAATCAATGACCACATCAACTCCTTTACAATCTTCCCCACAGTGTCGATGTTAAACCCACCAAGAACCTTACTCACTGCGTTTTGGGAGGCGGGTGAAGCTAACAGATTATATAAACGAGTACACGGGAAGTAAGTCTGTCTGTATATGTTGACAAAGGCCTCATGGTTGGCTAAGCATGAACTctacatcatttaaaaaaaaaaaaaaaaaacgttgctGTAAGGTTGGGTGTTTGTTGAAGCAACTTCTGGGAACCTCCAGTCCAGAGGAACAGACATCTAACTACTTGTACATACATTATCGCCATGCCAACCCACACATTCTAGTACGATTAACAATATGGATTCAGAAACAAAATTAAATTTTTTCAATATAAATCATGTCTCTTTCAGTCTTACCAAATCAGATGTCAGTAAAGGCAGCGGCATAGAAAaccactgagtggacaaaacattaggaacactttcttaatattgagttgcaatcccctttcgtcaggacgtggactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactccagtgtttcccacagttgtctcaagttggctgaatgtcctttggatggtggaccattgttAATACACACGGAAACTgttgaaaaatccagcagcgttgcagttcttcacacactTAAACTGGTGCGGCTGgcgcctactaccataccccgttcaaaggcacttcaatattttgtcttgacccttcaccatctgaatggcacacaatccatgtctcaaggcttaaccctccttctttaacctgtcacctccaccttcatctacactgattgaagaggatttaacaagtgacatcaataagggatcatatctttcacctggattcacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947853 True 1030 lncRNA 0.41 2 2668120 2669171

Neighbor

gene id symbol gene type direction distance location
LOC110499718 LOC106594636 coding downstream 444920 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 509164 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 518409 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 530032 2129033 ~ 2138088 (-)
LOC110512520 LOC106609724 coding downstream 539410 2113042 ~ 2128710 (-)
LOC118942830 NA coding upstream 360178 3029349 ~ 3030468 (-)
LOC110499739 grip1 coding upstream 919359 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 1544721 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 1942711 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 2023712 4692883 ~ 4704523 (-)
G1701895 NA non-coding downstream 1166 2666550 ~ 2666954 (-)
G1701878 LOC106594572 non-coding downstream 19643 2639201 ~ 2648477 (-)
G1701880 NA non-coding downstream 23527 2644067 ~ 2644593 (-)
G1701877 NA non-coding downstream 31290 2636452 ~ 2636830 (-)
G1701869 NA non-coding downstream 42367 2624664 ~ 2625753 (-)
G1701961 NA non-coding upstream 183643 2852814 ~ 2854209 (-)
G1701967 NA non-coding upstream 191211 2860382 ~ 2860900 (-)
G1701976 NA non-coding upstream 205778 2874949 ~ 2892965 (-)
G1701977 NA non-coding upstream 207724 2876895 ~ 2895091 (-)
G1702016 NA non-coding upstream 331241 3000412 ~ 3000873 (-)
G1701824 NA other downstream 92859 2572603 ~ 2577051 (-)
G1701041 NA other downstream 478454 2188433 ~ 2189666 (-)
LOC118942825 frs2 other downstream 1222244 1363229 ~ 1446417 (-)
LOC110511372 LOC106592130 other downstream 1344757 1319221 ~ 1348497 (-)
G1701930 NA other upstream 114771 2783942 ~ 2829582 (-)
G1702117 NA other upstream 559831 3229002 ~ 3230041 (-)
G1702141 NA other upstream 611931 3281102 ~ 3518377 (-)
G1702914 NA other upstream 1773078 4442249 ~ 4444919 (-)

Expression


Co-expression Network