Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701214 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2671465 ~ 2672545 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946936 | True | 1027 | lncRNA | 0.41 | 2 | 2671465 | 2672545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519348 | tbc1d15 | coding | upstream | 4187 | 2588642 ~ 2667278 (+) |
| LOC110519746 | LOC106597902 | coding | upstream | 91006 | 2579232 ~ 2580459 (+) |
| LOC110500958 | LOC106609839 | coding | upstream | 96283 | 2541008 ~ 2575182 (+) |
| LOC110499736 | NA | coding | upstream | 131413 | 2533735 ~ 2540052 (+) |
| trnak-cuu-147 | NA | coding | upstream | 138136 | 2533257 ~ 2533329 (+) |
| LOC118942987 | NA | coding | downstream | 58096 | 2730641 ~ 2731813 (+) |
| LOC110499725 | trhde | coding | downstream | 147342 | 2819887 ~ 3237572 (+) |
| LOC110516257 | LOC106590998 | coding | downstream | 712911 | 3385456 ~ 3391594 (+) |
| irak3 | irak3 | coding | downstream | 871107 | 3543652 ~ 3562592 (+) |
| helb | LOC106599032 | coding | downstream | 893094 | 3565639 ~ 3583498 (+) |
| G1701156 | NA | non-coding | upstream | 39014 | 2631713 ~ 2632451 (+) |
| G1701196 | NA | non-coding | upstream | 62015 | 2607206 ~ 2609450 (+) |
| G1701193 | NA | non-coding | upstream | 79766 | 2591411 ~ 2591699 (+) |
| G1701186 | NA | non-coding | upstream | 85042 | 2586181 ~ 2586423 (+) |
| G1701230 | NA | non-coding | downstream | 67576 | 2740121 ~ 2743926 (+) |
| G1701234 | NA | non-coding | downstream | 83062 | 2755607 ~ 2756065 (+) |
| G1701236 | NA | non-coding | downstream | 91145 | 2763690 ~ 2764041 (+) |
| G1701238 | NA | non-coding | downstream | 100884 | 2773429 ~ 2774646 (+) |
| G1701260 | NA | non-coding | downstream | 148795 | 2821340 ~ 2822497 (+) |
| G1699934 | NA | other | upstream | 801911 | 1867694 ~ 1869554 (+) |
| LOC110499743 | cnot2 | other | upstream | 902188 | 1688942 ~ 1769720 (+) |
| LOC110500915 | LOC106576535 | other | upstream | 1002245 | 1607414 ~ 1669220 (+) |
| G1699804 | NA | other | upstream | 1132585 | 1537956 ~ 1538880 (+) |
| G1701265 | NA | other | downstream | 172159 | 2844704 ~ 2849603 (+) |
| G1701596 | NA | other | downstream | 1101494 | 3774039 ~ 3776261 (+) |
| G1701654 | NA | other | downstream | 1260242 | 3932787 ~ 3936037 (+) |
| LOC110516816 | LOC107655592 | other | downstream | 1711511 | 4384016 ~ 4441236 (+) |
| G1702554 | NA | other | downstream | 1722448 | 4394993 ~ 4395515 (+) |
