Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701260 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 2821340 ~ 2822497 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1946999 | True | 1003 | lncRNA | 0.42 | 3 | 2821340 | 2822497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942987 | NA | coding | upstream | 89527 | 2730641 ~ 2731813 (+) |
| LOC110519348 | tbc1d15 | coding | upstream | 154062 | 2588642 ~ 2667278 (+) |
| LOC110519746 | LOC106597902 | coding | upstream | 240881 | 2579232 ~ 2580459 (+) |
| LOC110500958 | LOC106609839 | coding | upstream | 246158 | 2541008 ~ 2575182 (+) |
| LOC110499736 | NA | coding | upstream | 281288 | 2533735 ~ 2540052 (+) |
| LOC110516257 | LOC106590998 | coding | downstream | 562959 | 3385456 ~ 3391594 (+) |
| irak3 | irak3 | coding | downstream | 721155 | 3543652 ~ 3562592 (+) |
| helb | LOC106599032 | coding | downstream | 743142 | 3565639 ~ 3583498 (+) |
| LOC110516816 | LOC107655592 | coding | downstream | 1561519 | 4384016 ~ 4441236 (+) |
| si:dkey-39a18.1 | LOC106576636 | coding | downstream | 1628619 | 4451116 ~ 4475091 (+) |
| G1701238 | NA | non-coding | upstream | 46694 | 2773429 ~ 2774646 (+) |
| G1701236 | NA | non-coding | upstream | 57299 | 2763690 ~ 2764041 (+) |
| G1701234 | NA | non-coding | upstream | 65275 | 2755607 ~ 2756065 (+) |
| G1701230 | NA | non-coding | upstream | 77414 | 2740121 ~ 2743926 (+) |
| G1701214 | NA | non-coding | upstream | 148795 | 2671465 ~ 2672545 (+) |
| G1701243 | NA | non-coding | downstream | 4517 | 2827014 ~ 2841800 (+) |
| G1701265 | NA | non-coding | downstream | 22207 | 2844704 ~ 2849603 (+) |
| G1701266 | NA | non-coding | downstream | 30485 | 2852982 ~ 2854177 (+) |
| G1701279 | NA | non-coding | downstream | 56235 | 2878732 ~ 2879497 (+) |
| G1701280 | NA | non-coding | downstream | 57355 | 2879852 ~ 2897953 (+) |
| G1699934 | NA | other | upstream | 951786 | 1867694 ~ 1869554 (+) |
| LOC110499743 | cnot2 | other | upstream | 1052063 | 1688942 ~ 1769720 (+) |
| LOC110500915 | LOC106576535 | other | upstream | 1152120 | 1607414 ~ 1669220 (+) |
| G1699804 | NA | other | upstream | 1282460 | 1537956 ~ 1538880 (+) |
| G1701596 | NA | other | downstream | 951542 | 3774039 ~ 3776261 (+) |
| G1701654 | NA | other | downstream | 1110290 | 3932787 ~ 3936037 (+) |
| G1702554 | NA | other | downstream | 1572496 | 4394993 ~ 4395515 (+) |
