G1701279


Basic Information

Item Value
gene id G1701279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 2878732 ~ 2879497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947036
tagggtggcatttggtaAGCAGCACCACTTAAACACTGAAACTTCTCTAAGGCTAACTACCGGCTTTGCTTTCACTGTCAGAGGAAGGTAGTGGGGAAATGgaaggcgggagggagggagagagataaagacaagagagacagaaacagagagagcgagaggagtatgagagagacagagagagagggagagatcgagcgggagagagagaggtagagaaagagacagaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947036 True 231 lncRNA 0.50 2 2878732 2879497

Neighbor

gene id symbol gene type direction distance location
LOC118942987 NA coding upstream 146919 2730641 ~ 2731813 (+)
LOC110519348 tbc1d15 coding upstream 211454 2588642 ~ 2667278 (+)
LOC110519746 LOC106597902 coding upstream 298273 2579232 ~ 2580459 (+)
LOC110500958 LOC106609839 coding upstream 303550 2541008 ~ 2575182 (+)
LOC110499736 NA coding upstream 338680 2533735 ~ 2540052 (+)
LOC110516257 LOC106590998 coding downstream 505959 3385456 ~ 3391594 (+)
irak3 irak3 coding downstream 664155 3543652 ~ 3562592 (+)
helb LOC106599032 coding downstream 686142 3565639 ~ 3583498 (+)
LOC110516816 LOC107655592 coding downstream 1504519 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 1571619 4451116 ~ 4475091 (+)
G1701266 NA non-coding upstream 24555 2852982 ~ 2854177 (+)
G1701265 NA non-coding upstream 29129 2844704 ~ 2849603 (+)
G1701243 NA non-coding upstream 36932 2827014 ~ 2841800 (+)
G1701260 NA non-coding upstream 56235 2821340 ~ 2822497 (+)
G1701238 NA non-coding upstream 104086 2773429 ~ 2774646 (+)
G1701280 NA non-coding downstream 355 2879852 ~ 2897953 (+)
G1701281 NA non-coding downstream 1427 2880924 ~ 2899126 (+)
G1701296 NA non-coding downstream 37553 2917050 ~ 2917675 (+)
G1701313 NA non-coding downstream 70148 2949645 ~ 2950282 (+)
G1701398 NA non-coding downstream 284026 3163523 ~ 3167185 (+)
G1699934 NA other upstream 1009178 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 1109455 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 1209512 1607414 ~ 1669220 (+)
G1701596 NA other downstream 894542 3774039 ~ 3776261 (+)
G1701654 NA other downstream 1053290 3932787 ~ 3936037 (+)
G1702554 NA other downstream 1515496 4394993 ~ 4395515 (+)
G1702793 NA other downstream 2172950 5052447 ~ 5054464 (+)

Expression


Co-expression Network