G1701429


Basic Information

Item Value
gene id G1701429
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3242802 ~ 3244362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947210
TTGATGGAGACAATAAGAACAGCCGGGATATGGGTGCTTTTGTTGTCTCTCTCATGTTTTCCCCAAAGAGCAACACGGCTTGGTTTATAATTTCTGACTTATCCAAGAAGACCAAGCAAGGCCTCAGAATTGTATAACAGACATCCTTCCAGCTGTCTGGGAGTGATAGATTCAAAGGAAAATATCTTTAGCAATGCTCGATCCAATATTCTGAACTACTACACCCTACTCCATTATTCTGAACTACTACTACACCCCACTCCATTATTCTGAACTACTACACCacactccatctgtctccctacTGCTGGGCAgtaacagacacactctctctctcttttgatctatctctctctctccctcttcatatTGCTACCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947210 True 380 lncRNA 0.43 2 3242802 3244362

Neighbor

gene id symbol gene type direction distance location
LOC110499725 trhde coding upstream 5230 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 510989 2730641 ~ 2731813 (+)
LOC110519348 tbc1d15 coding upstream 575524 2588642 ~ 2667278 (+)
LOC110519746 LOC106597902 coding upstream 662343 2579232 ~ 2580459 (+)
LOC110500958 LOC106609839 coding upstream 667620 2541008 ~ 2575182 (+)
LOC110516257 LOC106590998 coding downstream 141094 3385456 ~ 3391594 (+)
irak3 irak3 coding downstream 299290 3543652 ~ 3562592 (+)
helb LOC106599032 coding downstream 321277 3565639 ~ 3583498 (+)
LOC110516816 LOC107655592 coding downstream 1139654 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 1206754 4451116 ~ 4475091 (+)
G1701421 NA non-coding upstream 14242 3228223 ~ 3228560 (+)
G1701418 NA non-coding upstream 17759 3224132 ~ 3225043 (+)
G1701399 NA non-coding upstream 73982 3164081 ~ 3168820 (+)
G1701398 NA non-coding upstream 75617 3163523 ~ 3167185 (+)
G1701313 NA non-coding upstream 292520 2949645 ~ 2950282 (+)
G1701440 NA non-coding downstream 30788 3275150 ~ 3276857 (+)
G1701449 NA non-coding downstream 62067 3306429 ~ 3306737 (+)
G1701451 NA non-coding downstream 63205 3307567 ~ 3308860 (+)
G1701456 NA non-coding downstream 85457 3329819 ~ 3330124 (+)
G1701474 NA non-coding downstream 130605 3374967 ~ 3377350 (+)
G1701265 NA other upstream 393199 2844704 ~ 2849603 (+)
G1699934 NA other upstream 1373248 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 1473525 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 1573582 1607414 ~ 1669220 (+)
G1701596 NA other downstream 529677 3774039 ~ 3776261 (+)
G1701654 NA other downstream 688425 3932787 ~ 3936037 (+)
G1702554 NA other downstream 1150631 4394993 ~ 4395515 (+)
G1702793 NA other downstream 1808085 5052447 ~ 5054464 (+)

Expression


Co-expression Network