Gene
RNA
| Item | Value |
|---|---|
| gene id | G1701456 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 3329819 ~ 3330124 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1947238 | True | 210 | lncRNA | 0.42 | 2 | 3329819 | 3330124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499725 | trhde | coding | upstream | 92247 | 2819887 ~ 3237572 (+) |
| LOC118942987 | NA | coding | upstream | 598006 | 2730641 ~ 2731813 (+) |
| LOC110519348 | tbc1d15 | coding | upstream | 662541 | 2588642 ~ 2667278 (+) |
| LOC110519746 | LOC106597902 | coding | upstream | 749360 | 2579232 ~ 2580459 (+) |
| LOC110500958 | LOC106609839 | coding | upstream | 754637 | 2541008 ~ 2575182 (+) |
| LOC110516257 | LOC106590998 | coding | downstream | 55332 | 3385456 ~ 3391594 (+) |
| irak3 | irak3 | coding | downstream | 213528 | 3543652 ~ 3562592 (+) |
| helb | LOC106599032 | coding | downstream | 235515 | 3565639 ~ 3583498 (+) |
| LOC110516816 | LOC107655592 | coding | downstream | 1053892 | 4384016 ~ 4441236 (+) |
| si:dkey-39a18.1 | LOC106576636 | coding | downstream | 1120992 | 4451116 ~ 4475091 (+) |
| G1701451 | NA | non-coding | upstream | 20959 | 3307567 ~ 3308860 (+) |
| G1701449 | NA | non-coding | upstream | 23082 | 3306429 ~ 3306737 (+) |
| G1701440 | NA | non-coding | upstream | 52962 | 3275150 ~ 3276857 (+) |
| G1701429 | NA | non-coding | upstream | 85457 | 3242802 ~ 3244362 (+) |
| G1701421 | NA | non-coding | upstream | 101259 | 3228223 ~ 3228560 (+) |
| G1701474 | NA | non-coding | downstream | 44843 | 3374967 ~ 3377350 (+) |
| G1701498 | NA | non-coding | downstream | 103275 | 3433399 ~ 3433867 (+) |
| G1701501 | NA | non-coding | downstream | 108889 | 3439013 ~ 3467039 (+) |
| G1701502 | NA | non-coding | downstream | 112907 | 3443031 ~ 3443413 (+) |
| G1701523 | NA | non-coding | downstream | 191170 | 3521294 ~ 3521821 (+) |
| G1701265 | NA | other | upstream | 480216 | 2844704 ~ 2849603 (+) |
| G1699934 | NA | other | upstream | 1460265 | 1867694 ~ 1869554 (+) |
| LOC110499743 | cnot2 | other | upstream | 1560542 | 1688942 ~ 1769720 (+) |
| LOC110500915 | LOC106576535 | other | upstream | 1660599 | 1607414 ~ 1669220 (+) |
| G1701596 | NA | other | downstream | 443915 | 3774039 ~ 3776261 (+) |
| G1701654 | NA | other | downstream | 602663 | 3932787 ~ 3936037 (+) |
| G1702554 | NA | other | downstream | 1064869 | 4394993 ~ 4395515 (+) |
| G1702793 | NA | other | downstream | 1722323 | 5052447 ~ 5054464 (+) |
