Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702174 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 3391150 ~ 3438393 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1948199 | False | 708 | lncRNA | 0.35 | 2 | 3391150 | 3391890 |
| TU1948200 | True | 272 | lncRNA | 0.38 | 2 | 3391150 | 3438393 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942830 | NA | coding | downstream | 360682 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 1167950 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 1232194 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 1241439 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 1253062 | 2129033 ~ 2138088 (-) |
| LOC110499739 | grip1 | coding | upstream | 150137 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | upstream | 775499 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 1173489 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 1254490 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 1284635 | 4723028 ~ 4728731 (-) |
| G1702147 | NA | non-coding | downstream | 76888 | 3307661 ~ 3314262 (-) |
| G1702146 | NA | non-coding | downstream | 77810 | 3306858 ~ 3313340 (-) |
| G1702104 | NA | non-coding | downstream | 153621 | 3235497 ~ 3237529 (-) |
| G1702106 | NA | non-coding | downstream | 184181 | 3206501 ~ 3206969 (-) |
| G1702072 | NA | non-coding | downstream | 280885 | 3109922 ~ 3110265 (-) |
| G1702200 | NA | non-coding | upstream | 22919 | 3461312 ~ 3461758 (-) |
| G1702201 | NA | non-coding | upstream | 26985 | 3465378 ~ 3467039 (-) |
| G1702209 | NA | non-coding | upstream | 64220 | 3502613 ~ 3503512 (-) |
| G1702215 | NA | non-coding | upstream | 86632 | 3525025 ~ 3525267 (-) |
| G1702221 | NA | non-coding | upstream | 90686 | 3529079 ~ 3529321 (-) |
| G1702117 | NA | other | downstream | 161109 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 561568 | 2783942 ~ 2829582 (-) |
| G1701824 | NA | other | downstream | 815889 | 2572603 ~ 2577051 (-) |
| G1701041 | NA | other | downstream | 1201484 | 2188433 ~ 2189666 (-) |
| LOC110512520 | LOC106609724 | other | downstream | 1267263 | 2113042 ~ 2128710 (-) |
| G1702914 | NA | other | upstream | 1003856 | 4442249 ~ 4444919 (-) |
| LOC118936570 | mdm1 | other | upstream | 1493821 | 4932214 ~ 4970391 (-) |
| G1703085 | NA | other | upstream | 1508205 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 1762434 | 5200387 ~ 5202057 (-) |
