G1701498


Basic Information

Item Value
gene id G1701498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3433399 ~ 3433867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947287
accaacgccacgttgcaccacagactgtccaggagttggcggatgctttagtccaggtctgggaggagatccctcaggagaccatccgccacctcatcaggagcatgcccaggcgttgtgggaggtcatacaggcacgtggaggccacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggttttccactttaattttgaatgtgactccaaatccagacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947287 True 259 lncRNA 0.51 2 3433399 3433867

Neighbor

gene id symbol gene type direction distance location
LOC110516257 LOC106590998 coding upstream 41805 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 195827 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 701586 2730641 ~ 2731813 (+)
LOC110519348 tbc1d15 coding upstream 766121 2588642 ~ 2667278 (+)
LOC110519746 LOC106597902 coding upstream 852940 2579232 ~ 2580459 (+)
irak3 irak3 coding downstream 109785 3543652 ~ 3562592 (+)
helb LOC106599032 coding downstream 131772 3565639 ~ 3583498 (+)
LOC110516816 LOC107655592 coding downstream 950149 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 1017249 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 1025879 4459746 ~ 4461571 (+)
G1701474 NA non-coding upstream 56049 3374967 ~ 3377350 (+)
G1701456 NA non-coding upstream 103275 3329819 ~ 3330124 (+)
G1701451 NA non-coding upstream 124539 3307567 ~ 3308860 (+)
G1701449 NA non-coding upstream 126662 3306429 ~ 3306737 (+)
G1701440 NA non-coding upstream 156542 3275150 ~ 3276857 (+)
G1701501 NA non-coding downstream 5146 3439013 ~ 3467039 (+)
G1701502 NA non-coding downstream 9164 3443031 ~ 3443413 (+)
G1701523 NA non-coding downstream 87427 3521294 ~ 3521821 (+)
G1701524 NA non-coding downstream 88764 3522631 ~ 3523063 (+)
G1701527 NA non-coding downstream 93580 3527447 ~ 3527657 (+)
G1701265 NA other upstream 583796 2844704 ~ 2849603 (+)
G1699934 NA other upstream 1563845 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 1664122 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 1764179 1607414 ~ 1669220 (+)
G1701596 NA other downstream 340172 3774039 ~ 3776261 (+)
G1701654 NA other downstream 498920 3932787 ~ 3936037 (+)
G1702554 NA other downstream 961126 4394993 ~ 4395515 (+)
G1702793 NA other downstream 1618580 5052447 ~ 5054464 (+)

Expression


Co-expression Network