G1702201


Basic Information

Item Value
gene id G1702201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3465378 ~ 3467039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1948234
CTCTCTCTAACTCCACAACACTCTTTCTAACTCCACAACACTCTCTctaactccacaacactctctctaactccacaacactctaactccacaacactctctctaactccacaacactctctctaacttcacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaacttcacaacactctctctaacttcacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccacaacactctctctaactccactctctttttctctcccagaTGAAAACCCTTATAGTGTGTTTGAATGCTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948234 True 660 lncRNA 0.44 3 3465378 3467039

Neighbor

gene id symbol gene type direction distance location
LOC118942830 NA coding downstream 434910 3029349 ~ 3030468 (-)
LOC110499718 LOC106594636 coding downstream 1242178 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 1306422 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 1315667 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 1327290 2129033 ~ 2138088 (-)
LOC110499739 grip1 coding upstream 121491 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding upstream 746853 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 1144843 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 1225844 4692883 ~ 4704523 (-)
LOC118942988 NA coding upstream 1255989 4723028 ~ 4728731 (-)
G1702200 NA non-coding downstream 3620 3461312 ~ 3461758 (-)
G1702174 NA non-coding downstream 26985 3391150 ~ 3438393 (-)
G1702147 NA non-coding downstream 151116 3307661 ~ 3314262 (-)
G1702146 NA non-coding downstream 152038 3306858 ~ 3313340 (-)
G1702104 NA non-coding downstream 227849 3235497 ~ 3237529 (-)
G1702209 NA non-coding upstream 35574 3502613 ~ 3503512 (-)
G1702215 NA non-coding upstream 57986 3525025 ~ 3525267 (-)
G1702221 NA non-coding upstream 62040 3529079 ~ 3529321 (-)
G1702222 NA non-coding upstream 62638 3529677 ~ 3529896 (-)
G1702225 NA non-coding upstream 70173 3537212 ~ 3537451 (-)
G1702117 NA other downstream 235337 3229002 ~ 3230041 (-)
G1701930 NA other downstream 635796 2783942 ~ 2829582 (-)
G1701824 NA other downstream 890117 2572603 ~ 2577051 (-)
G1701041 NA other downstream 1275712 2188433 ~ 2189666 (-)
LOC110512520 LOC106609724 other downstream 1341491 2113042 ~ 2128710 (-)
G1702914 NA other upstream 975210 4442249 ~ 4444919 (-)
LOC118936570 mdm1 other upstream 1465175 4932214 ~ 4970391 (-)
G1703085 NA other upstream 1479559 4946598 ~ 4947411 (-)
G1703190 NA other upstream 1733788 5200387 ~ 5202057 (-)

Expression


Co-expression Network