G1701523


Basic Information

Item Value
gene id G1701523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3521294 ~ 3521821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947321
GACTAGCACCTATCAGGAGCACTAGAGAGCTGTTATACACAGAACAGCACTCTGACTAGGACCTATCAGGAGCACTAGAGAGCTGTTATACACAGAACAGAACTCTGACTAGGAGGTGTTATACACAGAACAGCACTCTGACTAGGAGCTGTTATACACAGAACAGAACTCTGACTAGGAGGTGTTATACACAGAACAGCACACTGACTAGGAGGTGTTATACACAGAACAGTACTCTGACTAGGAGGTGTTATACACAGAACAGCACTCTGACTAGGAGGTGTTACACACAGAACA

Function

NR:

description
serine/arginine repetitive matrix protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947321 True 297 lncRNA 0.45 3 3521294 3521821

Neighbor

gene id symbol gene type direction distance location
LOC110516257 LOC106590998 coding upstream 129700 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 283722 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 789481 2730641 ~ 2731813 (+)
LOC110519348 tbc1d15 coding upstream 854016 2588642 ~ 2667278 (+)
LOC110519746 LOC106597902 coding upstream 940835 2579232 ~ 2580459 (+)
irak3 irak3 coding downstream 21831 3543652 ~ 3562592 (+)
helb LOC106599032 coding downstream 43818 3565639 ~ 3583498 (+)
LOC110516816 LOC107655592 coding downstream 862195 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 929295 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 937925 4459746 ~ 4461571 (+)
G1701501 NA non-coding upstream 54255 3439013 ~ 3467039 (+)
G1701502 NA non-coding upstream 77881 3443031 ~ 3443413 (+)
G1701498 NA non-coding upstream 87427 3433399 ~ 3433867 (+)
G1701474 NA non-coding upstream 143944 3374967 ~ 3377350 (+)
G1701456 NA non-coding upstream 191170 3329819 ~ 3330124 (+)
G1701524 NA non-coding downstream 810 3522631 ~ 3523063 (+)
G1701527 NA non-coding downstream 5626 3527447 ~ 3527657 (+)
G1701531 NA non-coding downstream 20421 3542242 ~ 3542473 (+)
G1701532 NA non-coding downstream 20807 3542628 ~ 3542829 (+)
G1701536 NA non-coding downstream 31241 3553062 ~ 3553618 (+)
G1701265 NA other upstream 671691 2844704 ~ 2849603 (+)
G1699934 NA other upstream 1651740 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 1752017 1688942 ~ 1769720 (+)
LOC110500915 LOC106576535 other upstream 1852074 1607414 ~ 1669220 (+)
G1701596 NA other downstream 252218 3774039 ~ 3776261 (+)
G1701654 NA other downstream 410966 3932787 ~ 3936037 (+)
G1702554 NA other downstream 873172 4394993 ~ 4395515 (+)
G1702793 NA other downstream 1530626 5052447 ~ 5054464 (+)

Expression


Co-expression Network