G1702303



Basic Information


Item Value
gene id G1702303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3816826 ~ 3857895 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1948395
ggcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaaccttccggttactagcccaatgctctaaccactaggctaccctgccgccccagtagtCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTCTGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAATAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTCCGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACCCAGTAGTCTTAATGAGTACAGTAGTACTAGTctatatctttctctttctctctctctctctctttctccctctctct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1948395 True 1120 lncRNA 0.43 2 3816826 3857895

Neighbor


gene id symbol gene type direction distance location
LOC118942830 NA coding downstream 786358 3029349 ~ 3030468 (-)
LOC110499718 LOC106594636 coding downstream 1593626 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 1657870 2150983 ~ 2158956 (-)
LOC118942827 NA coding downstream 1667115 2143995 ~ 2149711 (-)
LOC110499714 LOC106609803 coding downstream 1678738 2129033 ~ 2138088 (-)
trnav-uac-23 NA coding upstream 355997 4213892 ~ 4213965 (-)
LOC110499732 dyrk2 coding upstream 753987 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 834988 4692883 ~ 4704523 (-)
LOC118942988 NA coding upstream 865133 4723028 ~ 4728731 (-)
ifng ifngamma1 coding upstream 898858 4756753 ~ 4778081 (-)
G1702297 NA non-coding downstream 18415 3797949 ~ 3798411 (-)
G1702296 NA non-coding downstream 19193 3797382 ~ 3797633 (-)
G1702266 NA non-coding downstream 108694 3707263 ~ 3708132 (-)
G1702261 NA non-coding downstream 141717 3674706 ~ 3675109 (-)
G1702247 NA non-coding downstream 202906 3613653 ~ 3613920 (-)
G1702354 NA non-coding upstream 64624 3922519 ~ 3923386 (-)
G1702366 NA non-coding upstream 99601 3957496 ~ 3959208 (-)
G1702367 NA non-coding upstream 101503 3959398 ~ 3959976 (-)
G1702383 NA non-coding upstream 131766 3989661 ~ 3990204 (-)
G1702387 NA non-coding upstream 156373 4014268 ~ 4017033 (-)
LOC110499739 grip1 other downstream 228239 3585864 ~ 4306764 (-)
G1702141 NA other downstream 298449 3281102 ~ 3518377 (-)
G1702117 NA other downstream 586785 3229002 ~ 3230041 (-)
G1701930 NA other downstream 987244 2783942 ~ 2829582 (-)
G1701824 NA other downstream 1241565 2572603 ~ 2577051 (-)
G1702914 NA other upstream 584354 4442249 ~ 4444919 (-)
LOC118936570 mdm1 other upstream 1074319 4932214 ~ 4970391 (-)
G1703085 NA other upstream 1088703 4946598 ~ 4947411 (-)
G1703190 NA other upstream 1342932 5200387 ~ 5202057 (-)
G1703200 NA other upstream 1374740 5232635 ~ 5235225 (-)

Expression



Co-expression Network