Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 3922519 ~ 3923386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1948456 | False | 343 | lncRNA | 0.34 | 2 | 3922519 | 3923386 |
| TU1948455 | True | 217 | lncRNA | 0.34 | 2 | 3922921 | 3923386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942830 | NA | coding | downstream | 892051 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 1699319 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 1763563 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 1772808 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 1784431 | 2129033 ~ 2138088 (-) |
| trnav-uac-23 | NA | coding | upstream | 290506 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 688496 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 769497 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 799642 | 4723028 ~ 4728731 (-) |
| ifng | ifngamma1 | coding | upstream | 833367 | 4756753 ~ 4778081 (-) |
| G1702303 | NA | non-coding | downstream | 64624 | 3816826 ~ 3857895 (-) |
| G1702324 | NA | non-coding | downstream | 76868 | 3844179 ~ 3845651 (-) |
| G1702310 | NA | non-coding | downstream | 95526 | 3824988 ~ 3826993 (-) |
| G1702297 | NA | non-coding | downstream | 124108 | 3797949 ~ 3798411 (-) |
| G1702296 | NA | non-coding | downstream | 124886 | 3797382 ~ 3797633 (-) |
| G1702366 | NA | non-coding | upstream | 34110 | 3957496 ~ 3959208 (-) |
| G1702367 | NA | non-coding | upstream | 36012 | 3959398 ~ 3959976 (-) |
| G1702383 | NA | non-coding | upstream | 66275 | 3989661 ~ 3990204 (-) |
| G1702387 | NA | non-coding | upstream | 90882 | 4014268 ~ 4017033 (-) |
| G1702388 | NA | non-coding | upstream | 92680 | 4016066 ~ 4017395 (-) |
| LOC110499739 | grip1 | other | downstream | 333932 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 404142 | 3281102 ~ 3518377 (-) |
| G1702117 | NA | other | downstream | 692478 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 1092937 | 2783942 ~ 2829582 (-) |
| G1701824 | NA | other | downstream | 1347258 | 2572603 ~ 2577051 (-) |
| G1702914 | NA | other | upstream | 518863 | 4442249 ~ 4444919 (-) |
| LOC118936570 | mdm1 | other | upstream | 1008828 | 4932214 ~ 4970391 (-) |
| G1703085 | NA | other | upstream | 1023212 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 1277441 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 1309249 | 5232635 ~ 5235225 (-) |
