G1701653


Basic Information

Item Value
gene id G1701653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3924654 ~ 3925049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947485
TAAATATGCAGCaactctgttcagatggacatgaggagaactcagatggacatgaggagaactctgttcagatagacatgaagagaactcagatagacatgaggagaactcagatagacatgaggagacctctgttcagatagacatgaggagacctcagatagacatgaggagaactctgttcagatggacatgaggagaactctgatagacatgaggagaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947485 True 224 lncRNA 0.44 2 3924654 3925049

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 341156 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 362062 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 533060 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 687082 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1192841 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 458967 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 526067 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 534697 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 926940 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 1073177 4998226 ~ 5111935 (+)
G1701651 NA non-coding upstream 8140 3915474 ~ 3916514 (+)
G1701642 NA non-coding upstream 32050 3892047 ~ 3892604 (+)
G1701638 NA non-coding upstream 37107 3885919 ~ 3887547 (+)
G1701621 NA non-coding upstream 66591 3856767 ~ 3858063 (+)
G1701602 NA non-coding upstream 133721 3789957 ~ 3790933 (+)
G1701654 NA non-coding downstream 10412 3932787 ~ 3936037 (+)
G1701660 NA non-coding downstream 19675 3944724 ~ 3948377 (+)
G1701663 NA non-coding downstream 30342 3955391 ~ 3955999 (+)
G1701682 NA non-coding downstream 88275 4013324 ~ 4016147 (+)
G1701684 NA non-coding downstream 91130 4016179 ~ 4016529 (+)
G1701596 NA other upstream 148393 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1075051 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1271035 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2055100 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 2155377 1688942 ~ 1769720 (+)
G1702554 NA other downstream 469944 4394993 ~ 4395515 (+)
G1702793 NA other downstream 1127398 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 1259425 5182911 ~ 5200193 (+)

Expression


Co-expression Network