G1701654


Basic Information

Item Value
gene id G1701654
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 3932787 ~ 3936037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947490
gaggtagagaaagaaagactggtggaggtagagggagaaagactgatggaggtagagagagaaagactgatggaggtagagggggagagactgatggagggagagagactgatggaggtagagggagaaagactgatggaggtagagggagagagactgatggaggtagagagactgatggagggagagggagaaagactgatggaggtagagagactgatggagggagagggagaaagactgatggaggtagttgCAGTTCCATCTAAAGTTGTAGGTTCCTCTGTGGTTGAATACACCATCTATCTGAACTGAGTTTCTCTGAGCCCATAGTGACTCATGGTGAC
>TU1947491
gaggtagagaaagaaagactggtggaggtagagggagaaagactgatggaggtagagagagaaagactgatggaggtagagggggagagactgatggagggagagagactgatggaggtagagggagaaagactgatggaggtagagggagagagactgatggaggtagagagactgatggagggagagggagaaagactgatggaggtagagagactgatggagggagagggagaaagactgatggaggtagttgCAGTTCCATCTAAAGTTGTAGGTTCCTCTGTGGTTGAATACACCATCTATCTGAACTGAGTTTCTCTGAGCCCATAGTGACTCATGGTGAC
>TU1947496
gtagaggcagagagactgatggaggtagagggagagagactgaaggagggagagagactgatggaggtagagagactgatggagggagagggagaaagactgatggaggtagagagactgatggaggtagagagactgatggagggagagggagggagaaagactgatggaggtagagagactgatggaggtagagagactgatggaggtagttgCAGTTCCATCTAAAGTTGTAGGTTCCTCTGTGGTTGAATACACCATCTATCTGAACTGAGTTTCTCTGAGCCCATAGTGACTCATGGTGAC
>TU1947495
tggaggtagagggagagagactgatggaggtagagagactgatggaggtagagagactgatggagggagagggagggagaaagactgatggaggtagagagactgatggaggtagagagactgatggaggtagttgCAGTTCCATCTAAAGTTGTAGGTTCCTCTGTGGTTGAATACACCATCTATCTGAACTGAGTTTCTCTGAGCCCATAGTGACTCATGGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947490 False 347 TUCP 0.50 4 3932787 3936037
TU1947491 False 347 TUCP 0.50 4 3932787 3936037
TU1947496 False 306 TUCP 0.50 5 3933930 3936037
TU1947495 True 227 lncRNA 0.49 3 3935461 3936037

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 351963 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 372869 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 543867 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 697889 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1203648 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 447979 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 515079 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 523709 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 915952 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 1062189 4998226 ~ 5111935 (+)
G1701653 NA non-coding upstream 10412 3924654 ~ 3925049 (+)
G1701651 NA non-coding upstream 18947 3915474 ~ 3916514 (+)
G1701642 NA non-coding upstream 42857 3892047 ~ 3892604 (+)
G1701638 NA non-coding upstream 47914 3885919 ~ 3887547 (+)
G1701621 NA non-coding upstream 77398 3856767 ~ 3858063 (+)
G1701660 NA non-coding downstream 8687 3944724 ~ 3948377 (+)
G1701663 NA non-coding downstream 19354 3955391 ~ 3955999 (+)
G1701682 NA non-coding downstream 77287 4013324 ~ 4016147 (+)
G1701684 NA non-coding downstream 80142 4016179 ~ 4016529 (+)
G1701691 NA non-coding downstream 92754 4028791 ~ 4029973 (+)
G1701596 NA other upstream 159200 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1085858 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1281842 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2065907 1867694 ~ 1869554 (+)
LOC110499743 cnot2 other upstream 2166184 1688942 ~ 1769720 (+)
G1702554 NA other downstream 458956 4394993 ~ 4395515 (+)
G1702793 NA other downstream 1116410 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 1248437 5182911 ~ 5200193 (+)
G1702856 NA other downstream 1318128 5254165 ~ 5254885 (+)

Expression


Co-expression Network