Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702387 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4014268 ~ 4017033 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1948495 | False | 258 | lncRNA | 0.43 | 2 | 4014268 | 4014686 |
| TU1948496 | True | 258 | lncRNA | 0.41 | 4 | 4014268 | 4017033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942830 | NA | coding | downstream | 983800 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 1791068 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 1855312 | 2150983 ~ 2158956 (-) |
| LOC118942827 | NA | coding | downstream | 1864557 | 2143995 ~ 2149711 (-) |
| LOC110499714 | LOC106609803 | coding | downstream | 1876180 | 2129033 ~ 2138088 (-) |
| trnav-uac-23 | NA | coding | upstream | 196859 | 4213892 ~ 4213965 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 594849 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 675850 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 705995 | 4723028 ~ 4728731 (-) |
| ifng | ifngamma1 | coding | upstream | 739720 | 4756753 ~ 4778081 (-) |
| G1702383 | NA | non-coding | downstream | 24064 | 3989661 ~ 3990204 (-) |
| G1702367 | NA | non-coding | downstream | 54292 | 3959398 ~ 3959976 (-) |
| G1702366 | NA | non-coding | downstream | 55060 | 3957496 ~ 3959208 (-) |
| G1702354 | NA | non-coding | downstream | 90882 | 3922519 ~ 3923386 (-) |
| G1702324 | NA | non-coding | downstream | 168617 | 3844179 ~ 3845651 (-) |
| G1702400 | NA | non-coding | upstream | 21446 | 4038479 ~ 4038949 (-) |
| G1702428 | NA | non-coding | upstream | 82474 | 4099507 ~ 4100458 (-) |
| G1702434 | NA | non-coding | upstream | 98151 | 4115184 ~ 4116270 (-) |
| G1702449 | NA | non-coding | upstream | 153224 | 4170257 ~ 4171110 (-) |
| G1702457 | NA | non-coding | upstream | 177436 | 4194469 ~ 4195150 (-) |
| LOC110499739 | grip1 | other | downstream | 425681 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 495891 | 3281102 ~ 3518377 (-) |
| G1702117 | NA | other | downstream | 784227 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 1184686 | 2783942 ~ 2829582 (-) |
| G1701824 | NA | other | downstream | 1439007 | 2572603 ~ 2577051 (-) |
| G1702914 | NA | other | upstream | 425216 | 4442249 ~ 4444919 (-) |
| LOC118936570 | mdm1 | other | upstream | 915181 | 4932214 ~ 4970391 (-) |
| G1703085 | NA | other | upstream | 929565 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 1183794 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 1215602 | 5232635 ~ 5235225 (-) |
