G1701717


Basic Information

Item Value
gene id G1701717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4099391 ~ 4099791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947569
ctgtatgtgtaatgtttactgtttatttcacttttgtatattgtctacctcacttgctttggcaatgttaacacatgtttcccatgccaataaagccccttgaattgaattgaattgagagagagagacagagagagagagaggtcaGGAAAACTATGCACGATGATATATAGCATACTGGATGGAGTCATTTACAACCCAACATCAGGCTTGATAGCTTTCTCTCTACctgggttttactgtgttgtattgatctgtctgtctgtctttctctctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947569 True 279 lncRNA 0.39 2 4099391 4099791

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 515893 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 536799 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 707797 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 861819 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1367578 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 284225 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 351325 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 359955 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 752198 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 898435 4998226 ~ 5111935 (+)
G1701691 NA non-coding upstream 69418 4028791 ~ 4029973 (+)
G1701684 NA non-coding upstream 82862 4016179 ~ 4016529 (+)
G1701682 NA non-coding upstream 83244 4013324 ~ 4016147 (+)
G1701663 NA non-coding upstream 143392 3955391 ~ 3955999 (+)
G1701660 NA non-coding upstream 151014 3944724 ~ 3948377 (+)
G1701733 NA non-coding downstream 48944 4148735 ~ 4149430 (+)
G1701744 NA non-coding downstream 82241 4182032 ~ 4182768 (+)
G1701747 NA non-coding downstream 94750 4194541 ~ 4196167 (+)
G1701755 NA non-coding downstream 119177 4218968 ~ 4219630 (+)
G1701759 NA non-coding downstream 132487 4232278 ~ 4232748 (+)
G1701654 NA other upstream 163354 3932787 ~ 3936037 (+)
G1701596 NA other upstream 323130 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1249788 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1445772 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2229837 1867694 ~ 1869554 (+)
G1702554 NA other downstream 295202 4394993 ~ 4395515 (+)
G1702793 NA other downstream 952656 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 1084683 5182911 ~ 5200193 (+)
G1702856 NA other downstream 1154374 5254165 ~ 5254885 (+)

Expression


Co-expression Network