G1701747


Basic Information

Item Value
gene id G1701747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4194541 ~ 4196167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947604
gaactaggagatacctgttatactgttacactgaactaggagatacctgttatactgttatactgaactaggagatacctgttatactgttacactgaactaggagatacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagatacctgttatactgttacactgaactaggagatacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggattaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagatacctgttatactgttacactgaactaggagatacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggattaggagagacctgttatactgttacactgaactaggagagacctgttgttctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggattaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggattaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggattaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactggataaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgttacactgaactaggagagacctgttatactgaactaggagagacctgttatactgttacactgaactaggagagacctgtt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613027 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947604 True 1339 lncRNA 0.40 2 4194541 4196167

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 611043 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 631949 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 802947 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 956969 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1462728 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 187849 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 254949 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 263579 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 655822 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 802059 4998226 ~ 5111935 (+)
G1701744 NA non-coding upstream 11773 4182032 ~ 4182768 (+)
G1701733 NA non-coding upstream 45111 4148735 ~ 4149430 (+)
G1701717 NA non-coding upstream 94750 4099391 ~ 4099791 (+)
G1701691 NA non-coding upstream 164568 4028791 ~ 4029973 (+)
G1701684 NA non-coding upstream 178012 4016179 ~ 4016529 (+)
G1701755 NA non-coding downstream 22801 4218968 ~ 4219630 (+)
G1701759 NA non-coding downstream 36111 4232278 ~ 4232748 (+)
G1701763 NA non-coding downstream 51387 4247554 ~ 4250590 (+)
G1701765 NA non-coding downstream 56922 4253089 ~ 4253535 (+)
G1701773 NA non-coding downstream 86914 4283081 ~ 4283569 (+)
G1701654 NA other upstream 258504 3932787 ~ 3936037 (+)
G1701596 NA other upstream 418280 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1344938 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1540922 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2324987 1867694 ~ 1869554 (+)
G1702554 NA other downstream 198826 4394993 ~ 4395515 (+)
G1702793 NA other downstream 856280 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 988307 5182911 ~ 5200193 (+)
G1702856 NA other downstream 1057998 5254165 ~ 5254885 (+)

Expression


Co-expression Network