G1701755


Basic Information

Item Value
gene id G1701755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4218968 ~ 4219630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1947615
tgatgattctagaactgaaacaccatgttaaaacctacatgatgattctagaactgaaacaccatgttaaaacctacatgatgattctagaactgaaacactaggtaaaacctacatgatgattctagaactgaaacactaggtaaaacctacatgatgattctagaactgaaacactaggtaaaacctacatgatgattctagaactgaaacaccatgttaaaacctacatgatgattctagaactgaaacaccatgttaaaacctacatgatgattctagaactgaaacaccatgttaaaacctacatgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1947615 True 313 lncRNA 0.34 2 4218968 4219630

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 635470 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 656376 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 827374 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 981396 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1487155 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 164386 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 231486 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 240116 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 632359 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 778596 4998226 ~ 5111935 (+)
G1701747 NA non-coding upstream 22801 4194541 ~ 4196167 (+)
G1701744 NA non-coding upstream 36200 4182032 ~ 4182768 (+)
G1701733 NA non-coding upstream 69538 4148735 ~ 4149430 (+)
G1701717 NA non-coding upstream 119177 4099391 ~ 4099791 (+)
G1701691 NA non-coding upstream 188995 4028791 ~ 4029973 (+)
G1701759 NA non-coding downstream 12648 4232278 ~ 4232748 (+)
G1701763 NA non-coding downstream 27924 4247554 ~ 4250590 (+)
G1701765 NA non-coding downstream 33459 4253089 ~ 4253535 (+)
G1701773 NA non-coding downstream 63451 4283081 ~ 4283569 (+)
G1701775 NA non-coding downstream 72758 4292388 ~ 4292721 (+)
G1701654 NA other upstream 282931 3932787 ~ 3936037 (+)
G1701596 NA other upstream 442707 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1369365 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1565349 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2349414 1867694 ~ 1869554 (+)
G1702554 NA other downstream 175363 4394993 ~ 4395515 (+)
G1702793 NA other downstream 832817 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 964844 5182911 ~ 5200193 (+)
G1702856 NA other downstream 1034535 5254165 ~ 5254885 (+)

Expression


Co-expression Network