G1702513


Basic Information

Item Value
gene id G1702513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4309336 ~ 4309539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1948642
cacacacactaaccagcTTACTTCATGCTTCCGTGAGCATACGGACAGAGGGATGCTgagtggagaggagacaggaccgtgctgtaaagaggagacagtaccatgctgtaaagaggagacaggaccatgctgtaaagaggagacatgctgtaaagaggagacaggaccatgctgtaaagaggagacatgcTGTAAAGatgagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948642 True 204 lncRNA 0.50 1 4309336 4309539

Neighbor

gene id symbol gene type direction distance location
helb LOC106599032 coding upstream 725838 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 746744 3543652 ~ 3562592 (+)
LOC110516257 LOC106590998 coding upstream 917742 3385456 ~ 3391594 (+)
LOC110499725 trhde coding upstream 1071764 2819887 ~ 3237572 (+)
LOC118942987 NA coding upstream 1577523 2730641 ~ 2731813 (+)
LOC110516816 LOC107655592 coding downstream 74477 4384016 ~ 4441236 (+)
si:dkey-39a18.1 LOC106576636 coding downstream 141577 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding downstream 150207 4459746 ~ 4461571 (+)
LOC118942787 LOC106594295 coding downstream 542450 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 688687 4998226 ~ 5111935 (+)
G1701775 NA non-coding upstream 16615 4292388 ~ 4292721 (+)
G1701773 NA non-coding upstream 25767 4283081 ~ 4283569 (+)
G1701765 NA non-coding upstream 55801 4253089 ~ 4253535 (+)
G1701763 NA non-coding upstream 58746 4247554 ~ 4250590 (+)
G1701759 NA non-coding upstream 76588 4232278 ~ 4232748 (+)
G1702515 NA non-coding downstream 3059 4312598 ~ 4312911 (+)
G1702525 NA non-coding downstream 15017 4324556 ~ 4324800 (+)
G1702527 NA non-coding downstream 18473 4328012 ~ 4328980 (+)
G1702539 NA non-coding downstream 41378 4350917 ~ 4351141 (+)
G1702546 NA non-coding downstream 65254 4374793 ~ 4374993 (+)
G1701654 NA other upstream 373299 3932787 ~ 3936037 (+)
G1701596 NA other upstream 533075 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1459733 2844704 ~ 2849603 (+)
LOC110519348 tbc1d15 other upstream 1655717 2588642 ~ 2667278 (+)
G1699934 NA other upstream 2439782 1867694 ~ 1869554 (+)
G1702554 NA other downstream 85454 4394993 ~ 4395515 (+)
G1702793 NA other downstream 742908 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 874935 5182911 ~ 5200193 (+)
G1702856 NA other downstream 944626 5254165 ~ 5254885 (+)

Expression


Co-expression Network