G1702879



Basic Information


Item Value
gene id G1702879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4348441 ~ 4348753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1949167
atgcaacagtagctaagatggggagaagtctggccataataaagcgctgctctgccttcttaacaacactatcaacaaggcaggtcctacaggctctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggctctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggctctagtttctaccttcttaacaacactatcaacaaagtAGGTCCTACAAGCCTTAGTTTTGTCCcgcctggactactgttcagtcgtgtggtcaggtgccacaaagagggactttgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1949167 True 313 lncRNA 0.46 1 4348441 4348753

Neighbor


gene id symbol gene type direction distance location
LOC110499739 grip1 coding downstream 41677 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding downstream 134476 4213892 ~ 4213965 (-)
LOC118942830 NA coding downstream 1317973 3029349 ~ 3030468 (-)
LOC110499718 LOC106594636 coding downstream 2125241 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 2189485 2150983 ~ 2158956 (-)
LOC110499732 dyrk2 coding upstream 263129 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 344130 4692883 ~ 4704523 (-)
LOC118942988 NA coding upstream 374275 4723028 ~ 4728731 (-)
ifng ifngamma1 coding upstream 408000 4756753 ~ 4778081 (-)
LOC118936570 mdm1 coding upstream 583463 4932214 ~ 4970391 (-)
G1702876 NA non-coding downstream 5410 4342831 ~ 4343031 (-)
G1702532 NA non-coding downstream 15093 4333111 ~ 4333348 (-)
G1702528 NA non-coding downstream 19196 4328408 ~ 4329245 (-)
G1702516 NA non-coding downstream 30654 4317014 ~ 4317787 (-)
G1702514 NA non-coding downstream 38901 4309310 ~ 4309540 (-)
G1702882 NA non-coding upstream 14528 4363281 ~ 4364702 (-)
G1702884 NA non-coding upstream 26036 4374789 ~ 4375004 (-)
G1702889 cand1 non-coding upstream 65948 4414701 ~ 4417943 (-)
G1702905 LOC106591200 non-coding upstream 81054 4429807 ~ 4431853 (-)
G1702906 NA non-coding upstream 83209 4431962 ~ 4432390 (-)
G1702141 NA other downstream 830064 3281102 ~ 3518377 (-)
G1702117 NA other downstream 1118400 3229002 ~ 3230041 (-)
G1701930 NA other downstream 1518859 2783942 ~ 2829582 (-)
G1701824 NA other downstream 1773180 2572603 ~ 2577051 (-)
G1702914 NA other upstream 93496 4442249 ~ 4444919 (-)
G1703085 NA other upstream 597845 4946598 ~ 4947411 (-)
G1703190 NA other upstream 852074 5200387 ~ 5202057 (-)
G1703200 NA other upstream 883882 5232635 ~ 5235225 (-)

Expression



Co-expression Network