Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702889 |
| gene name | cand1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4414701 ~ 4417943 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cand1 | Predicted to be involved in SCF complex assembly and protein ubiquitination. Predicted to be active in nucleus. Orthologous to human CAND1 (cullin associated and neddylation dissociated 1). |
| description |
|---|
| PREDICTED: cullin-associated NEDD8-dissociated protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949179 | True | 287 | lncRNA | 0.56 | 2 | 4414701 | 4417943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499739 | grip1 | coding | downstream | 107937 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | downstream | 200736 | 4213892 ~ 4213965 (-) |
| LOC118942830 | NA | coding | downstream | 1384233 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 2191501 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 2255745 | 2150983 ~ 2158956 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 193939 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 274940 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 305085 | 4723028 ~ 4728731 (-) |
| ifng | ifngamma1 | coding | upstream | 338810 | 4756753 ~ 4778081 (-) |
| LOC118936570 | mdm1 | coding | upstream | 514273 | 4932214 ~ 4970391 (-) |
| G1702884 | NA | non-coding | downstream | 39697 | 4374789 ~ 4375004 (-) |
| G1702882 | NA | non-coding | downstream | 49999 | 4363281 ~ 4364702 (-) |
| G1702879 | NA | non-coding | downstream | 65948 | 4348441 ~ 4348753 (-) |
| G1702876 | NA | non-coding | downstream | 71670 | 4342831 ~ 4343031 (-) |
| G1702532 | NA | non-coding | downstream | 81353 | 4333111 ~ 4333348 (-) |
| G1702905 | LOC106591200 | non-coding | upstream | 11864 | 4429807 ~ 4431853 (-) |
| G1702906 | NA | non-coding | upstream | 14019 | 4431962 ~ 4432390 (-) |
| G1702914 | NA | non-coding | upstream | 24306 | 4442249 ~ 4444919 (-) |
| G1702915 | NA | non-coding | upstream | 27552 | 4445495 ~ 4445715 (-) |
| G1702916 | NA | non-coding | upstream | 28534 | 4446477 ~ 4446974 (-) |
| G1702141 | NA | other | downstream | 896324 | 3281102 ~ 3518377 (-) |
| G1702117 | NA | other | downstream | 1184660 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 1585119 | 2783942 ~ 2829582 (-) |
| G1701824 | NA | other | downstream | 1839440 | 2572603 ~ 2577051 (-) |
| G1703085 | NA | other | upstream | 528655 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 782884 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 814692 | 5232635 ~ 5235225 (-) |
