Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4415162 ~ 4415754 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1948702 | False | 307 | lncRNA | 0.38 | 2 | 4415162 | 4415754 |
| TU1948703 | True | 255 | lncRNA | 0.38 | 2 | 4415162 | 4415754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| helb | LOC106599032 | coding | upstream | 831664 | 3565639 ~ 3583498 (+) |
| irak3 | irak3 | coding | upstream | 852570 | 3543652 ~ 3562592 (+) |
| LOC110516257 | LOC106590998 | coding | upstream | 1023568 | 3385456 ~ 3391594 (+) |
| LOC110499725 | trhde | coding | upstream | 1177590 | 2819887 ~ 3237572 (+) |
| LOC118942987 | NA | coding | upstream | 1683349 | 2730641 ~ 2731813 (+) |
| si:dkey-39a18.1 | LOC106576636 | coding | downstream | 35362 | 4451116 ~ 4475091 (+) |
| LOC118942831 | LOC106576636 | coding | downstream | 43992 | 4459746 ~ 4461571 (+) |
| LOC118942787 | LOC106594295 | coding | downstream | 436235 | 4851989 ~ 4852917 (+) |
| LOC118936571 | rap1b | coding | downstream | 582472 | 4998226 ~ 5111935 (+) |
| LOC110490690 | nu107 | coding | downstream | 704366 | 5120120 ~ 5173429 (+) |
| G1702559 | NA | non-coding | upstream | 3116 | 4411677 ~ 4412046 (+) |
| G1702557 | NA | non-coding | upstream | 7289 | 4407199 ~ 4407873 (+) |
| G1702555 | NA | non-coding | upstream | 15633 | 4398521 ~ 4399529 (+) |
| G1702546 | NA | non-coding | upstream | 40169 | 4374793 ~ 4374993 (+) |
| G1702539 | NA | non-coding | upstream | 64021 | 4350917 ~ 4351141 (+) |
| G1702561 | NA | non-coding | downstream | 41 | 4415795 ~ 4417355 (+) |
| G1702563 | NA | non-coding | downstream | 13034 | 4428788 ~ 4429527 (+) |
| G1702542 | NA | non-coding | downstream | 26498 | 4442252 ~ 4442754 (+) |
| G1702543 | NA | non-coding | downstream | 27839 | 4443593 ~ 4444240 (+) |
| G1702579 | NA | non-coding | downstream | 63102 | 4478856 ~ 4479378 (+) |
| LOC110516816 | LOC107655592 | other | upstream | 14181 | 4384016 ~ 4441236 (+) |
| G1702554 | NA | other | upstream | 19647 | 4394993 ~ 4395515 (+) |
| G1701654 | NA | other | upstream | 479125 | 3932787 ~ 3936037 (+) |
| G1701596 | NA | other | upstream | 638901 | 3774039 ~ 3776261 (+) |
| G1701265 | NA | other | upstream | 1565559 | 2844704 ~ 2849603 (+) |
| G1702793 | NA | other | downstream | 636693 | 5052447 ~ 5054464 (+) |
| LOC110516940 | LOC106609861 | other | downstream | 768720 | 5182911 ~ 5200193 (+) |
| G1702856 | NA | other | downstream | 838411 | 5254165 ~ 5254885 (+) |
| LOC110511233 | LOC107655547 | other | downstream | 1169777 | 5563222 ~ 5598052 (+) |
| G1703391 | NA | other | downstream | 1301445 | 5717199 ~ 5717701 (+) |
