Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702905 |
| gene name | LOC106591200 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4429807 ~ 4431853 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cullin-associated NEDD8-dissociated protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949198 | False | 269 | lncRNA | 0.61 | 2 | 4429807 | 4431853 |
| TU1949197 | True | 449 | lncRNA | 0.52 | 2 | 4431279 | 4431853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499739 | grip1 | coding | downstream | 123043 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | downstream | 215842 | 4213892 ~ 4213965 (-) |
| LOC118942830 | NA | coding | downstream | 1399339 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 2206607 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 2270851 | 2150983 ~ 2158956 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 180029 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 261030 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 291175 | 4723028 ~ 4728731 (-) |
| ifng | ifngamma1 | coding | upstream | 324900 | 4756753 ~ 4778081 (-) |
| LOC118936570 | mdm1 | coding | upstream | 500363 | 4932214 ~ 4970391 (-) |
| G1702889 | cand1 | non-coding | downstream | 11864 | 4414701 ~ 4417943 (-) |
| G1702884 | NA | non-coding | downstream | 54803 | 4374789 ~ 4375004 (-) |
| G1702882 | NA | non-coding | downstream | 65105 | 4363281 ~ 4364702 (-) |
| G1702879 | NA | non-coding | downstream | 81054 | 4348441 ~ 4348753 (-) |
| G1702876 | NA | non-coding | downstream | 86776 | 4342831 ~ 4343031 (-) |
| G1702906 | NA | non-coding | upstream | 109 | 4431962 ~ 4432390 (-) |
| G1702914 | NA | non-coding | upstream | 10396 | 4442249 ~ 4444919 (-) |
| G1702915 | NA | non-coding | upstream | 13642 | 4445495 ~ 4445715 (-) |
| G1702916 | NA | non-coding | upstream | 14624 | 4446477 ~ 4446974 (-) |
| G1702917 | NA | non-coding | upstream | 16148 | 4448001 ~ 4448842 (-) |
| G1702141 | NA | other | downstream | 911430 | 3281102 ~ 3518377 (-) |
| G1702117 | NA | other | downstream | 1199766 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 1600225 | 2783942 ~ 2829582 (-) |
| G1701824 | NA | other | downstream | 1854546 | 2572603 ~ 2577051 (-) |
| G1703085 | NA | other | upstream | 514745 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 768974 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 800782 | 5232635 ~ 5235225 (-) |
