G1702591


Basic Information

Item Value
gene id G1702591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4512264 ~ 4512470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1948750
ACCATAGGAAATAGCAACAAAGCTCCATCCATCCAAGACCACCTGTCAGCCTAGCAGAGTTTAAAACCATAGAAACACCCTATGAAGTGATTAAGAGTCTCTTCCACTATCATCAACTCAATGATTCCTCAATCCTCAATCATCAACTGGCATTCCTCCGATGTGCCCTGGTCAAGCTCTACGTAGCTGCTAAGCGCTAGGCCAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948750 True 207 lncRNA 0.45 1 4512264 4512470

Neighbor

gene id symbol gene type direction distance location
si:dkey-39a18.1 LOC106576636 coding upstream 37173 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 50693 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 71028 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 928766 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 949672 3543652 ~ 3562592 (+)
LOC118942787 LOC106594295 coding downstream 339519 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 485756 4998226 ~ 5111935 (+)
LOC110490690 nu107 coding downstream 607650 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 661190 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 663025 5175495 ~ 5176684 (+)
G1702587 NA non-coding upstream 5378 4506542 ~ 4506886 (+)
G1702586 NA non-coding upstream 8052 4503979 ~ 4504212 (+)
G1702584 NA non-coding upstream 13248 4498400 ~ 4499016 (+)
G1702581 NA non-coding upstream 21343 4490688 ~ 4490921 (+)
G1702579 NA non-coding upstream 32886 4478856 ~ 4479378 (+)
G1702593 NA non-coding downstream 6318 4518788 ~ 4519009 (+)
G1702608 NA non-coding downstream 37285 4549755 ~ 4550102 (+)
G1702618 NA non-coding downstream 63889 4576359 ~ 4576829 (+)
G1702594 NA non-coding downstream 92591 4605061 ~ 4607007 (+)
G1702632 NA non-coding downstream 110393 4622863 ~ 4623198 (+)
G1702554 NA other upstream 116749 4394993 ~ 4395515 (+)
G1701654 NA other upstream 576227 3932787 ~ 3936037 (+)
G1701596 NA other upstream 736003 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1662661 2844704 ~ 2849603 (+)
G1702793 NA other downstream 539977 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 672004 5182911 ~ 5200193 (+)
G1702856 NA other downstream 741695 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 1073061 5563222 ~ 5598052 (+)
G1703391 NA other downstream 1204729 5717199 ~ 5717701 (+)

Expression


Co-expression Network