Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4549195 ~ 4549685 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: amphiphysin isoform X13 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949274 | True | 216 | lncRNA | 0.39 | 2 | 4549195 | 4549685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499739 | grip1 | coding | downstream | 242431 | 3585864 ~ 4306764 (-) |
| trnav-uac-23 | NA | coding | downstream | 335230 | 4213892 ~ 4213965 (-) |
| LOC118942830 | NA | coding | downstream | 1518727 | 3029349 ~ 3030468 (-) |
| LOC110499718 | LOC106594636 | coding | downstream | 2325995 | 2190139 ~ 2223200 (-) |
| LOC118942828 | LOC106594636 | coding | downstream | 2390239 | 2150983 ~ 2158956 (-) |
| LOC110499732 | dyrk2 | coding | upstream | 62197 | 4611882 ~ 4636619 (-) |
| LOC110516460 | LOC106593189 | coding | upstream | 143198 | 4692883 ~ 4704523 (-) |
| LOC118942988 | NA | coding | upstream | 173343 | 4723028 ~ 4728731 (-) |
| ifng | ifngamma1 | coding | upstream | 207068 | 4756753 ~ 4778081 (-) |
| LOC118936570 | mdm1 | coding | upstream | 382531 | 4932214 ~ 4970391 (-) |
| G1702944 | NA | non-coding | downstream | 11488 | 4534067 ~ 4537707 (-) |
| G1702942 | NA | non-coding | downstream | 18365 | 4528767 ~ 4530830 (-) |
| G1702941 | NA | non-coding | downstream | 26232 | 4522443 ~ 4522963 (-) |
| G1702932 | NA | non-coding | downstream | 59003 | 4489948 ~ 4490192 (-) |
| G1702917 | NA | non-coding | downstream | 100353 | 4448001 ~ 4448842 (-) |
| G1702955 | NA | non-coding | upstream | 16073 | 4565758 ~ 4611286 (-) |
| G1702956 | NA | non-coding | upstream | 21403 | 4571088 ~ 4571844 (-) |
| G1702957 | NA | non-coding | upstream | 23038 | 4572723 ~ 4574498 (-) |
| G1702964 | NA | non-coding | upstream | 48192 | 4597877 ~ 4600067 (-) |
| G1702953 | NA | non-coding | upstream | 55375 | 4605060 ~ 4607012 (-) |
| G1702914 | NA | other | downstream | 104276 | 4442249 ~ 4444919 (-) |
| G1702141 | NA | other | downstream | 1030818 | 3281102 ~ 3518377 (-) |
| G1702117 | NA | other | downstream | 1319154 | 3229002 ~ 3230041 (-) |
| G1701930 | NA | other | downstream | 1719613 | 2783942 ~ 2829582 (-) |
| G1703085 | NA | other | upstream | 396913 | 4946598 ~ 4947411 (-) |
| G1703190 | NA | other | upstream | 651142 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 682950 | 5232635 ~ 5235225 (-) |
| LOC118942834 | LOC106576655 | other | upstream | 687723 | 5236240 ~ 5313033 (-) |
