Gene
RNA
| Item | Value |
|---|---|
| gene id | G1702618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 4576359 ~ 4576829 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1948794 | True | 427 | lncRNA | 0.51 | 2 | 4576359 | 4576829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-39a18.1 | LOC106576636 | coding | upstream | 101268 | 4451116 ~ 4475091 (+) |
| LOC118942831 | LOC106576636 | coding | upstream | 114788 | 4459746 ~ 4461571 (+) |
| LOC110516816 | LOC107655592 | coding | upstream | 135123 | 4384016 ~ 4441236 (+) |
| helb | LOC106599032 | coding | upstream | 992861 | 3565639 ~ 3583498 (+) |
| irak3 | irak3 | coding | upstream | 1013767 | 3543652 ~ 3562592 (+) |
| LOC118942787 | LOC106594295 | coding | downstream | 275160 | 4851989 ~ 4852917 (+) |
| LOC118936571 | rap1b | coding | downstream | 421397 | 4998226 ~ 5111935 (+) |
| LOC110490690 | nu107 | coding | downstream | 543291 | 5120120 ~ 5173429 (+) |
| LOC118942832 | LOC106576641 | coding | downstream | 596831 | 5173660 ~ 5179939 (+) |
| LOC118942833 | NA | coding | downstream | 598666 | 5175495 ~ 5176684 (+) |
| G1702608 | NA | non-coding | upstream | 26257 | 4549755 ~ 4550102 (+) |
| G1702593 | NA | non-coding | upstream | 57350 | 4518788 ~ 4519009 (+) |
| G1702591 | NA | non-coding | upstream | 63889 | 4512264 ~ 4512470 (+) |
| G1702587 | NA | non-coding | upstream | 69473 | 4506542 ~ 4506886 (+) |
| G1702586 | NA | non-coding | upstream | 72147 | 4503979 ~ 4504212 (+) |
| G1702594 | NA | non-coding | downstream | 28232 | 4605061 ~ 4607007 (+) |
| G1702632 | NA | non-coding | downstream | 46034 | 4622863 ~ 4623198 (+) |
| G1702636 | LOC106576541 | non-coding | downstream | 50012 | 4626841 ~ 4627627 (+) |
| G1702643 | NA | non-coding | downstream | 70215 | 4647044 ~ 4647549 (+) |
| G1702644 | NA | non-coding | downstream | 72593 | 4649422 ~ 4649636 (+) |
| G1702554 | NA | other | upstream | 180844 | 4394993 ~ 4395515 (+) |
| G1701654 | NA | other | upstream | 640322 | 3932787 ~ 3936037 (+) |
| G1701596 | NA | other | upstream | 800098 | 3774039 ~ 3776261 (+) |
| G1701265 | NA | other | upstream | 1726756 | 2844704 ~ 2849603 (+) |
| G1702793 | NA | other | downstream | 475618 | 5052447 ~ 5054464 (+) |
| LOC110516940 | LOC106609861 | other | downstream | 607645 | 5182911 ~ 5200193 (+) |
| G1702856 | NA | other | downstream | 677336 | 5254165 ~ 5254885 (+) |
| LOC110511233 | LOC107655547 | other | downstream | 1008702 | 5563222 ~ 5598052 (+) |
| G1703391 | NA | other | downstream | 1140370 | 5717199 ~ 5717701 (+) |
