G1702953


Basic Information

Item Value
gene id G1702953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4605060 ~ 4607012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949283
CTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCAACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCGAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCAACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCAACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCAACTGCACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCAACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACTGTCTCGAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTATACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCGAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGCTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTATACAACTTTTAGAAGACAGTCTCGAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTCTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGACAGTCTCTAGAGTTACTACTACACAACTTTTAGAAGAaggaagttaaaaaaaaaaaaacagaatctTGAACCGAGCAACAACGTTGATAGATGTTAGTACTCTTTACCACAGCCACGTACGCTGTACATATGTGAAATTTGCGATGGGTTCAATGTGGATTTGTGTACATATGTATAATGTCTTTGCCTCTGGTGAAATGCTGCTGGAAGCACTACATGAATGTTGTAGTGGGTTTTTAAGCTCGGTCAGTTTTACTATAGTGTATGTAATGTACAGCTAATGGAAGGTCACACTTTTTTTTGTGATTATTTGTTAAATTTTATTGTTGTGGCCGGGAAAATGTTATTAAATAAAAAAGTTTTAAGGTCCATCTTT

Function

NR:

description
antimicrobial peptides-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949283 True 1808 lncRNA 0.36 2 4605060 4607012

Neighbor

gene id symbol gene type direction distance location
LOC110499739 grip1 coding downstream 298296 3585864 ~ 4306764 (-)
trnav-uac-23 NA coding downstream 391095 4213892 ~ 4213965 (-)
LOC118942830 NA coding downstream 1574592 3029349 ~ 3030468 (-)
LOC110499718 LOC106594636 coding downstream 2381860 2190139 ~ 2223200 (-)
LOC118942828 LOC106594636 coding downstream 2446104 2150983 ~ 2158956 (-)
LOC110499732 dyrk2 coding upstream 4870 4611882 ~ 4636619 (-)
LOC110516460 LOC106593189 coding upstream 85871 4692883 ~ 4704523 (-)
LOC118942988 NA coding upstream 116016 4723028 ~ 4728731 (-)
ifng ifngamma1 coding upstream 149741 4756753 ~ 4778081 (-)
LOC118936570 mdm1 coding upstream 325204 4932214 ~ 4970391 (-)
G1702964 NA non-coding downstream 4993 4597877 ~ 4600067 (-)
G1702957 NA non-coding downstream 30562 4572723 ~ 4574498 (-)
G1702956 NA non-coding downstream 33216 4571088 ~ 4571844 (-)
G1702949 NA non-coding downstream 55375 4549195 ~ 4549685 (-)
G1702944 NA non-coding downstream 67353 4534067 ~ 4537707 (-)
G1702978 NA non-coding upstream 21253 4628265 ~ 4628725 (-)
G1702988 NA non-coding upstream 53582 4660594 ~ 4660807 (-)
G1702991 NA non-coding upstream 61665 4668677 ~ 4672288 (-)
G1703007 NA non-coding upstream 158931 4765943 ~ 4779718 (-)
G1702914 NA other downstream 160141 4442249 ~ 4444919 (-)
G1702141 NA other downstream 1086683 3281102 ~ 3518377 (-)
G1702117 NA other downstream 1375019 3229002 ~ 3230041 (-)
G1701930 NA other downstream 1775478 2783942 ~ 2829582 (-)
G1703085 NA other upstream 339586 4946598 ~ 4947411 (-)
G1703190 NA other upstream 593815 5200387 ~ 5202057 (-)
G1703200 NA other upstream 625623 5232635 ~ 5235225 (-)
LOC118942834 LOC106576655 other upstream 630396 5236240 ~ 5313033 (-)

Expression


Co-expression Network