G1702643



Basic Information


Item Value
gene id G1702643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4647044 ~ 4647549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1948823
agtctgtagtatctgagttattacattctagtgtgtagtatctgagagttattacattctagtgtgtagtatctgagagttattacattctagtgtgtagtatctgagagttattacattctagtctgtagtatctgagagttattacattctagtctgtagtatctgagttattacattctagtgtgtagtatctgagttattacattctagtgtgttgtatctgagagttattacattctagtgtgtggtatctgagagttattacattctagtgtgtggtatctgagagttattacattctagtgtgtagtatctgagttattacattctagtgtgtagtatatgagagttattacattctagtgtgtagtatctgagagttattacattctagtgtgtggtacagtatgtGTGAGTTATTATATTGTTACTTTACCTGTTCTTAATGAGTCGTACACCTCCAGTATTTCACCTTCTGtcagctggcaccctattccctatat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1948823 True 506 lncRNA 0.34 1 4647044 4647549

Neighbor


gene id symbol gene type direction distance location
si:dkey-39a18.1 LOC106576636 coding upstream 171953 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 185473 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 205808 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1063546 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 1084452 3543652 ~ 3562592 (+)
LOC118942787 LOC106594295 coding downstream 204440 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 350677 4998226 ~ 5111935 (+)
LOC110490690 nu107 coding downstream 472571 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 526111 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 527946 5175495 ~ 5176684 (+)
G1702636 LOC106576541 non-coding upstream 19417 4626841 ~ 4627627 (+)
G1702632 NA non-coding upstream 23846 4622863 ~ 4623198 (+)
G1702594 NA non-coding upstream 40037 4605061 ~ 4607007 (+)
G1702618 NA non-coding upstream 70215 4576359 ~ 4576829 (+)
G1702608 NA non-coding upstream 96942 4549755 ~ 4550102 (+)
G1702644 NA non-coding downstream 1873 4649422 ~ 4649636 (+)
G1702645 NA non-coding downstream 3614 4651163 ~ 4651373 (+)
G1702646 NA non-coding downstream 4666 4652215 ~ 4652621 (+)
G1702648 NA non-coding downstream 10460 4658009 ~ 4658378 (+)
G1702655 NA non-coding downstream 26421 4673970 ~ 4675027 (+)
G1702554 NA other upstream 251529 4394993 ~ 4395515 (+)
G1701654 NA other upstream 711007 3932787 ~ 3936037 (+)
G1701596 NA other upstream 870783 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1797441 2844704 ~ 2849603 (+)
G1702793 NA other downstream 404898 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 536925 5182911 ~ 5200193 (+)
G1702856 NA other downstream 606616 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 937982 5563222 ~ 5598052 (+)
G1703391 NA other downstream 1069650 5717199 ~ 5717701 (+)

Expression



Co-expression Network