G1702644


Basic Information

Item Value
gene id G1702644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4649422 ~ 4649636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1948824
ACCTGTACTGAGGCCCAGACATTCTCCTGAAACCTGTGACCTCACTAAGACCTGTACTAAGGCCCAGACATTCTCCTGAACCCTGTGACCTCACTAAGACCTGTACTGAGGCCCAGACATTCTCCTGAACCCTGTGACCTCACTAAGACCTGTACTAAGGCCCAGACATTCTCCTGAACCCTGTGACCTCACTAAGACCTGTACTAAGGCCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948824 True 215 lncRNA 0.52 1 4649422 4649636

Neighbor

gene id symbol gene type direction distance location
si:dkey-39a18.1 LOC106576636 coding upstream 174331 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 187851 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 208186 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1065924 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 1086830 3543652 ~ 3562592 (+)
LOC118942787 LOC106594295 coding downstream 202353 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 348590 4998226 ~ 5111935 (+)
LOC110490690 nu107 coding downstream 470484 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 524024 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 525859 5175495 ~ 5176684 (+)
G1702643 NA non-coding upstream 1873 4647044 ~ 4647549 (+)
G1702636 LOC106576541 non-coding upstream 21795 4626841 ~ 4627627 (+)
G1702632 NA non-coding upstream 26224 4622863 ~ 4623198 (+)
G1702594 NA non-coding upstream 42415 4605061 ~ 4607007 (+)
G1702618 NA non-coding upstream 72593 4576359 ~ 4576829 (+)
G1702645 NA non-coding downstream 1527 4651163 ~ 4651373 (+)
G1702646 NA non-coding downstream 2579 4652215 ~ 4652621 (+)
G1702648 NA non-coding downstream 8373 4658009 ~ 4658378 (+)
G1702655 NA non-coding downstream 24334 4673970 ~ 4675027 (+)
G1702659 NA non-coding downstream 40203 4689839 ~ 4690190 (+)
G1702554 NA other upstream 253907 4394993 ~ 4395515 (+)
G1701654 NA other upstream 713385 3932787 ~ 3936037 (+)
G1701596 NA other upstream 873161 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1799819 2844704 ~ 2849603 (+)
G1702793 NA other downstream 402811 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 534838 5182911 ~ 5200193 (+)
G1702856 NA other downstream 604529 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 935895 5563222 ~ 5598052 (+)
G1703391 NA other downstream 1067563 5717199 ~ 5717701 (+)

Expression


Co-expression Network