G1702648


Basic Information

Item Value
gene id G1702648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4658009 ~ 4658378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1948828
cgtcagtcacacagtcagtcagtcagtcatatgGCCCATGTACTGTCCAATGGGCAGCCAGACACCAGCCTTTACCTGACTGTCTCCATCAAGTCATATGGCCCCATGTCCTGTCCAATGGGCAGCCAGACACCAGCCTTTACCTGACTGTCTCCACCAAGTCATATTGCCCCATGTCCTGTCCAATGGGCAGCCAGACACCAGGGATGAGGGTTGGAGGTgctagtgtaaccgatgtgaaatggctagctagttagcggtggtgcgcgctaatagcgtttcaatcggtgacgtcactcgctctgagaccttgaagtagtggttccccttgctctgcaagagccgcggcttttgtggagcgatgggtaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948828 True 370 lncRNA 0.54 1 4658009 4658378

Neighbor

gene id symbol gene type direction distance location
si:dkey-39a18.1 LOC106576636 coding upstream 182918 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 196438 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 216773 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1074511 3565639 ~ 3583498 (+)
irak3 irak3 coding upstream 1095417 3543652 ~ 3562592 (+)
LOC118942787 LOC106594295 coding downstream 193611 4851989 ~ 4852917 (+)
LOC118936571 rap1b coding downstream 339848 4998226 ~ 5111935 (+)
LOC110490690 nu107 coding downstream 461742 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 515282 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 517117 5175495 ~ 5176684 (+)
G1702646 NA non-coding upstream 5388 4652215 ~ 4652621 (+)
G1702645 NA non-coding upstream 6636 4651163 ~ 4651373 (+)
G1702644 NA non-coding upstream 8373 4649422 ~ 4649636 (+)
G1702643 NA non-coding upstream 10460 4647044 ~ 4647549 (+)
G1702636 LOC106576541 non-coding upstream 30382 4626841 ~ 4627627 (+)
G1702655 NA non-coding downstream 15592 4673970 ~ 4675027 (+)
G1702659 NA non-coding downstream 31461 4689839 ~ 4690190 (+)
G1702660 NA non-coding downstream 33218 4691596 ~ 4698714 (+)
G1702666 NA non-coding downstream 69624 4728002 ~ 4728236 (+)
G1702681 NA non-coding downstream 129646 4788024 ~ 4794116 (+)
G1702554 NA other upstream 262494 4394993 ~ 4395515 (+)
G1701654 NA other upstream 721972 3932787 ~ 3936037 (+)
G1701596 NA other upstream 881748 3774039 ~ 3776261 (+)
G1701265 NA other upstream 1808406 2844704 ~ 2849603 (+)
G1702793 NA other downstream 394069 5052447 ~ 5054464 (+)
LOC110516940 LOC106609861 other downstream 526096 5182911 ~ 5200193 (+)
G1702856 NA other downstream 595787 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 927153 5563222 ~ 5598052 (+)
G1703391 NA other downstream 1058821 5717199 ~ 5717701 (+)

Expression


Co-expression Network