G1703038


Basic Information

Item Value
gene id G1703038
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 4857163 ~ 4857903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949432
gtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCTATCAGAGTAGGACACCTGTTTAAGAGAGGTGAtgtctagcagagtagaacacctgtttaagaGGTGATGTCTatcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCtagc
>TU1949434
gtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCTATCAGAGTAGGACACCTGTTTAAGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCTatcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCtagc
>TU1949435
gtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCTATCAGAGTAGGACACCTGTTTAAGAGGTGATGTCTatcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGAtgtctagcagagtagaacacctgtttaagaGAGGTGATGTCtagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949432 False 550 lncRNA 0.43 2 4857163 4857903
TU1949434 False 550 lncRNA 0.43 2 4857163 4857903
TU1949435 True 513 lncRNA 0.43 2 4857163 4857903

Neighbor

gene id symbol gene type direction distance location
ifng ifngamma1 coding downstream 79082 4756753 ~ 4778081 (-)
LOC118942988 NA coding downstream 128432 4723028 ~ 4728731 (-)
LOC110516460 LOC106593189 coding downstream 152640 4692883 ~ 4704523 (-)
LOC110499732 dyrk2 coding downstream 220628 4611882 ~ 4636619 (-)
trnav-uac-23 NA coding downstream 643198 4213892 ~ 4213965 (-)
LOC118936570 mdm1 coding upstream 74313 4932214 ~ 4970391 (-)
LOC118942989 NA coding upstream 194715 5052618 ~ 5060318 (-)
LOC110518655 LOC106592876 coding upstream 344911 5202814 ~ 5224336 (-)
LOC118942990 NA coding upstream 368166 5226069 ~ 5228087 (-)
LOC118942834 LOC106576655 coding upstream 378337 5236240 ~ 5313033 (-)
G1703015 NA non-coding downstream 60901 4788103 ~ 4796262 (-)
G1703007 NA non-coding downstream 77445 4765943 ~ 4779718 (-)
G1702991 NA non-coding downstream 184875 4668677 ~ 4672288 (-)
G1702988 NA non-coding downstream 196356 4660594 ~ 4660807 (-)
G1703079 NA non-coding upstream 67734 4925637 ~ 4925920 (-)
G1703080 NA non-coding upstream 70829 4928732 ~ 4929322 (-)
G1703064 NA non-coding upstream 77200 4935103 ~ 4935716 (-)
G1703068 NA non-coding upstream 101007 4958910 ~ 4961893 (-)
G1702914 NA other downstream 412244 4442249 ~ 4444919 (-)
LOC110499739 grip1 other downstream 1268576 3585864 ~ 4306764 (-)
G1702141 NA other downstream 1338786 3281102 ~ 3518377 (-)
G1702117 NA other downstream 1627122 3229002 ~ 3230041 (-)
G1701930 NA other downstream 2027581 2783942 ~ 2829582 (-)
G1703085 NA other upstream 88695 4946598 ~ 4947411 (-)
G1703190 NA other upstream 342924 5200387 ~ 5202057 (-)
G1703200 NA other upstream 374732 5232635 ~ 5235225 (-)

Expression


Co-expression Network