G1702785


Basic Information

Item Value
gene id G1702785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5015457 ~ 5016002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949045
ctccttccttccttccttccttccttctctccctccttccttctcttctctccttccttccgtcacttcctccttccttccgtcacttcctccttccttcccatccctccttccttctctccctccttccatcccatccttccctccctacttctttcctccccctctgaAACACAGGGACAGCAGGGAGAAACATCCATTCCAGATGTCTGGGGTGAGAATGCGCTCCCAAATAGAAGGCTATTTATTCCCTATAGAGTGGGACACAGTGGACTTGTTGTTGTTATCATGTTATAGAGCAGAAACATTAAAGAGGACTTAAAATGTTTCATGTACACCCCTTTAACAGGACAAACTACTGTTACAAAACAACTCACCAACCACCCAGTAGCATATTCACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949045 True 403 lncRNA 0.47 2 5015457 5016002

Neighbor

gene id symbol gene type direction distance location
LOC118942787 LOC106594295 coding upstream 162540 4851989 ~ 4852917 (+)
si:dkey-39a18.1 LOC106576636 coding upstream 540366 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 553886 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 574221 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1431959 3565639 ~ 3583498 (+)
LOC110490690 nu107 coding downstream 104118 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 157658 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 159493 5175495 ~ 5176684 (+)
LOC110516940 LOC106609861 coding downstream 166909 5182911 ~ 5200193 (+)
LOC118942835 LOC106576675 coding downstream 324532 5340534 ~ 5350434 (+)
G1702784 NA non-coding upstream 1495 5013017 ~ 5013962 (+)
G1702765 NA non-coding upstream 38592 4976387 ~ 4976865 (+)
G1702762 NA non-coding upstream 43572 4971400 ~ 4971885 (+)
G1702761 NA non-coding upstream 44192 4970944 ~ 4971265 (+)
G1702745 LOC106600154 non-coding upstream 71691 4936606 ~ 4943766 (+)
G1702787 NA non-coding downstream 3728 5019730 ~ 5020339 (+)
G1702789 NA non-coding downstream 24831 5040833 ~ 5041623 (+)
G1702792 NA non-coding downstream 35008 5051010 ~ 5052163 (+)
G1702794 NA non-coding downstream 37160 5053162 ~ 5055310 (+)
G1702795 NA non-coding downstream 37563 5053565 ~ 5055750 (+)
G1702554 NA other upstream 619942 4394993 ~ 4395515 (+)
G1701654 NA other upstream 1079420 3932787 ~ 3936037 (+)
G1701596 NA other upstream 1239196 3774039 ~ 3776261 (+)
G1701265 NA other upstream 2165854 2844704 ~ 2849603 (+)
G1702793 NA other downstream 36445 5052447 ~ 5054464 (+)
G1702856 NA other downstream 238163 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 569529 5563222 ~ 5598052 (+)
G1703391 NA other downstream 701197 5717199 ~ 5717701 (+)

Expression


Co-expression Network